Gene detail

Detailed information of FUN_006424-T1 in Siderastrea siderea

Genomic Location: contig_4:19052608...19068838
NR annotation: no NCBI-NR hit recorded
Species Siderastrea siderea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_006424-T1

ATGGGGAAACCAAGATTAAACAAAGGAGCTGGGAAGAGAGCAAGAAGCAGTTCGGAAGAGGAGCTCGGTAATCAGTTTATCAAACGAGCAAACGAGCTGCATTGTGGCTCATCTCAGgaaAGAGGTCCGgctcaacaaaatatcaaaAGTTACTTCACCAAGGAAACATCTCAACTTTGTACAACGTTAGGCCAGGAAACCAAAGGGTCTGGAAAAAGAAAGAGTCTCAAACTATCAACTAAAAAGGTCAGTAGGATCAACAACAGTTGTTCTTCTGTTGTACCAAAAGAAACGCACAAAGCTGAAAACACCACAAGCAAAACTGAGACGTCAACTGCATCATTGCAAACCAACAGGAATATCACTGACCTAAAGGACTTTACAAAGATCTTAAATGTCAAGGTAAAGAGAACCTCACcagcaaagaaagaaaaggcaaaagTCTCCCCTAGGAGTAAAAGTGAATCTTACAGGAATAGCGGTGCACCAACAAATACAAGATATGACTCCTTGGTTACCAGTAATAAAAGTAATACGGTAATAAATTTGGAAGATGACGATCTTATCCCGCCCACACCATCCCCGGCAGGACATCACAGCTTTATAAATTGTCAAGCCCAGTGGTCTTCCTCGTCAACAAAGATTCAACAATGGCAAAGTTCCCCATGTTTTCCACAGGCAGAGATCTCTAAGGATTTAACTAAAAGATCTCTGTCACTCAGTGAGAAAACTGGTGTAGCAGCAATGAGTAAaaagatgaataaaaataagtcTTTACAAGATAAAAAGGCTGTTACTAAGGTTCATGAGTGTTCATCTActggaaactcagaaaaaactTTTTATGAGGAAAAGAACACAATAATGGACAGTATTACTTTGGACAAGAATAGCTGTCATCTTGCTGTTACATCTAGTAATAAAGAAGAGTCAGTTGTAACTGCATCTTCGTGCAACGCTGTGGAAACTTCATCAACAGTTGCCACTAGTAGAAAGAAGTATAAATTGTCCCGCAAGCCAAAGCTTCCAAAGGTAGTGTCAAGCCCACTGAAGAAACATGACATCTGTGGAACAATAGCTAAGACTTCTCAGAACAGCAAGCAACTGCAGAAAGAAGCAGAGCTGCCTGGTCAAGAGGAATCCACTTCAGTTATTGCTCCATCAAAATGTGTTGTTTTAAGATCAAAAATGAAAAGGTCAGCTACAAAAGGAAGCTCCCCATTACAGAAACGATTGCAAACAGATCTACCTTTGTCTGCAAAGAATGCAGTGAAACATAACTTATGGGAGAAACTAGATCAATGTTCTCAAAGTAGCAGCCCTGAGGAGCACCTAGGATACCAGGCATTACATGTAGATTCCAATCATTGCCACGTAACAGATAATTATACTGACGATAAGAGCATAATGGAAGAATACACCATGGACACATGCTTAGAAAATTGTTCACCTAATGAAAAATTACTGGAAAGCTTACAATCATTAGGTGAAGGAAAATGTAACCAAGAAAAAATGGTtattgaacaaaatgaaaagGGCGTTGGAAAATGCACAGCAATTGAAACCGATCAAAGGAATGAACAGTTTAAATCTCCAAGTAAGTCTGAAGATGCAGCAGAATATAACAGTTTACTGGCTGGCATTGAGTGGTCACCTTTGATCAGTGGTTCTGCAACTCAACACATTACAAGAAAAAGTTCATGTAAAGCACTGTTCTCCCCTGTCAATGATGCCAAACAGACTCAAATGATTTCCAAGGACCTTGAAACTAAATGCTCCCTCTCTGGAGCTACCGGCTACAGTCGCTTCTTGGTACTTGAGGTCTCCCGCAGAGAACTGGTGGATGAACAAGTTGTGGCTAAGTATGGAAGACATTTGTCAGAAAAGGTTCTTCGATTGTTTGATGAGGCTCTAAGTCAAGAGAAGTTCTGCAGCCTGAGAGAAGACTGGGAGTTGAGTGAAGTTGAACCTGGTGACATAGTACGCATAACAGGGACATTTGACTCAAAGACAGGAATGTGTATCCTTGACAACTCCACTGACCAGTACCTTGTAGTCCATCCCGATACTTTGGTATCTGGAACTActgtttccatagcaacaaaGTGTTTACGGCAGAGCATCCTCAATGAGCGATTCCGCACTGAAGGCCAGAGTGAAGCAATGTTGATTGGAACACTTCTGCATGATCTGTTTGACTTAGCTATGGAGTTTCATGAATTCTCACCTGACACCCTTTTGAAAAGAGCCTGTGGACTCCTCCACAAACTGTCCTACCTGGATGACTTGTATAGCTTGGGACAGACAGAGAACTGGGCACTAGAGAAAATCAAGGAGCACATTCCATTGCTCTGTGAGTGGGCCAAGAAATTTGTGGCTCCTTTTCCACGCCCTGATTTTGGAACCATGGATTTTAAGACCCCTGATAACCCACAGGATGCGGAGCAACCCAGTGTCTGTGTGTCTGCCCTGAAGGACATTGAGGAGAACATCTGGTCACCAAGATTTGGATTGAAGGGCAAAATTGATGCCACAGTTGAAGTTAAGATTGACAGAAGGCCCAAAATCAGACGACACAAGCCTGATACAGACAACCAGGTGAAGACAAAAGTAATACCACTGGAACTGAAGACAGGCAAAATGTTCACCAAACTTGGTTCAATTGAGCACCGAGCTCAGGTGATCCTATACACCCTGCTCATGTCTGATCGCTACTCTCAAGCAGTTGACGCTGgcttattgttctacgtgaagtCATCCCACATGCTTAGTGTGCCTGGCTTCCTTCATGAGAAGAGGGCTCTGATCATGAAAAGGAATGAAGTTGCACGTTACTTGACACTTAACAGAGCTGGAACTACAGGCACCATGCCAGctaTGTTGAAGGATCTCAACACCTGTCGGCGTTGTTCTCAAGCACAAAACTGCACCACCTTCCACAAAGCTGCTGAACAAGGAGACGGCACGACCAGTGGTCTCGGATCATTCTTTAATGAGATGACAGACCACATGACGAAGACCTATGTCAGCTACTTCACAGACTGGTTTAAACTGGTTTGTCTGGAAGGGAAGGAAATGGAAGAGAAGAGGACTCAACAGGAAATTTGGTGCTTAGAAGGATGGGAGCGAGAGAAGCTGGGCCGCTGTTTCAGTGGAATGGTCCTGAAGCCGCATGCTCCAGTGATAGCCAACAGTCGCTACTGTAGACACACATTTGAGCGTGCAGTGGATCATCCCAGTGACATACCCCTACAGGATGTGCCTATTACTGTAGGAGATCGGGTAATTTTGAGCAAAGACAGCAATGGAGCCATAGCTCTGGCAGCAGGCTATATCCACGAGGTGAGAAACAAGGAAGTTGTTGTCTTACTAGACAGAGATTTAACTAAGAGGTATGATGCAAAGACTGAAGTAACAAGCGCAAGACTTTATCGTCTGGACAAAGACGAAGAGTACAGCACCCTAACTACACTGTGGTCTAACATGGCTAAACTGTTCAAAGGTGACTCAGATAGAGACACTCAGCTGCGGCGGCAAATCATTGACTTAGAGCCGCCAGcattttcaagaaaaagaaggaaTGATACAGTGGCAATGTCAAGCCAGACTTCCGATATCACAGATTACTTCTCCCAGCAATCGCCGTCTCAAAACAGCAGAAGCCAGAAAATCTTATCTGATCCGGCCAATGAGTCGATTCTCCAAGAGCTAAACTCGGATCAGCGGAAGGCAGTGTCCAAAGCACTGTGTGCACACCAATATGTACTGATACTCGGTATGCCAGGCACTGGTAAAACCACCACCATTTCCTGCCTGGTCCGTGTACTGGTGGCCAGTGGCAAGTCTGTTCTCCTTACTAGCTACACTCACACTGCTGTGGATAATATTCTGCTCAAGCTTAAAGAGGCAAATGTGGATTTTCTCCGCCTTGGCCAAGTTCATAAGGTTCTTCCTGAATTACAATCATATACTGCTCAGATGGCGGCATCTGATATCAAGACTGTGAATGAACTGAAACAGCTCTACGAATCCAAGTCTGTTGTGGCGACCACCTGTTTGGGTGTGAACCATGCCCTGTTCTCCCAGCGCTCGTTTGATTACTGCATAGTGGACGAGGCATCACAAATCACACAGCCCGTGTGTATCGGACCTCTTAGGCGAGCTCGTGTCTTCATCTTAGTAGGAGATCATTATCAGCTGCCGCCTTTGGTGCAGAGTGTGGAAGCCAGGGAGGAAGGAATGGACGTCAGTTTATTTAAGCGTCTCTCTGAGCGACATCCTCATGCGGTAGTCAGTCTTGAGCATCAGTACCGAATGAATCAGGACATCATGGAGCTATCCAACATGCTGATATATGAACACAGACTCAAGTGTGGCACGGAGGGCGTGGCACGTGCTCTCTTACAGCTGCCTAACTGGGACCAGCTAACCAGTTATGTTAAGGAAAACATCGCTGATGATACAGATACCTGGCTGCTTGACGCACTCGTTCCCAGTCGCTCAGTGGTGTTCCTGGACACGGACGGAGTCCCCGCGCCGGAAACACGAACTGAGCACCTGGTAGCCAACGAAATCGAGGCCTTATTAGTTTACCAACTGGCCTGTGCATTGTTGAAAGGCGGACTGCAGCCTGCTTCACTGGGAATCATCTCTCCATACAGGCACCAGCTTAAGCTCATATCCCAAATCTTCCTCAGGGATACCAGTGGCAGACAGGATGAGATTGAGATTAACACTGTGGATAAATATCAAGGGAGGGACAAGTCATGCATTATCGTGTCTTTAGTTCGCAGTAACGACCACTGCAATGTCGGAGATCTGTTGAGAGACTGGCGTCGAGTCAACGTGGCCGTGACTCGTGCTAAGCGGAAGTTGATTTTGATTGGATCTTTGTCAACGCTTAAGGGCAGCTTGTTGTTGCAGGAGCTTTTTGACCTATTGGAGAGAAAGGACTGGTTGCAAGTTCTTCCTAGTAGGGCGCATAAACTGTACGAGTTTGTGGGAAAGTCATCCCAGGCTACTCCGGTCAGAAGCCTTGGGACTCCGAGATATCGCTTCAAGAACTGA

Transcript

FUN_006424-T1

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08696 all species →	Dna2	DNA replication factor Dna2	Family	Interproscan
PF21123 all species →	Dna2_Rift	Dna2 Rift barrel domain	Domain	Interproscan
PF13087 all species →	AAA_12	AAA domain	Domain	Interproscan
PF13086 all species →	AAA_11	AAA domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014808 all species →	Domain	DNA replication factor Dna2, N-terminal	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR048459 all species →	Domain	DNA2, rift barrel domain	Interproscan
IPR026851 all species →	Domain	DNA replication ATP-dependent helicase/nuclease Dna2/JHS1, DEXXQ-box helicase domain	Interproscan
IPR041679 all species →	Domain	DNA2/NAM7 helicase-like, C-terminal	Interproscan
IPR045055 all species →	Family	DNA2/NAM7-like helicase	Interproscan
IPR041677 all species →	Domain	DNA2/NAM7 helicase, helicase domain	Interproscan
IPR011604 all species →	Homologous_superfamily	PD-(D/E)XK endonuclease-like domain superfamily	Interproscan
IPR047187 all species →	Domain	Upf1-like, C-terminal helicase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10887 all species →	DNA2/NAM7 HELICASE FAMILY	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0017116 all species →	Molecular Function	single-stranded DNA helicase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0017108 all species →	Molecular Function	5'-flap endonuclease activity	Interproscan
GO:0071932 all species →	Biological Process	replication fork reversal	Interproscan
GO:0004386 all species →	Molecular Function	helicase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10742	DNA2; DNA replication ATP-dependent helicase/nuclease Dna2	EC:5.6.2.3 EC:3.1.-.-	DNA replication proteins	ko03032	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of FUN_006424-T1 across 85 RNA-seq samples of Siderastrea siderea. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

85Samples

61TPM > 0

7Conditions

379.4Max TPM

79.8Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
holobiont · low.pH_high.temp	20	17	110.81	375.50
holobiont · low.pH Control.temp	20	13	65.52	266.42
holobiont · control.pH_high.temp	20	13	92.08	379.44
holobiont · control.pH Control.temp	19	12	73.81	223.12
Whole organism	4	4	2.04	3.23
unannotated	1	1	1.82	1.82
live coral tissue/skeleton	1	1	1.53	1.53

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR22214402	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	375.50
SRR22214420	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	288.67
SRR22214414	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	247.57
SRR22214410	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	214.93
SRR22214412	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	165.45
SRR22214407	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	138.78
SRR22214403	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	121.57
SRR22214421	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	112.83
SRR22214404	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	100.77
SRR22214419	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	73.77
SRR22214423	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	66.05
SRR22214408	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	66.03
SRR22214406	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	64.62
SRR22214418	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	63.12
SRR22214413	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	55.77
SRR22214415	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	49.39
SRR22214417	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	11.31
SRR22214405	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	0.00
SRR22214409	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	0.00
SRR22214416	holobiont · low.pH_high.temp	holobiont	not recorded	low.pH_high.temp	SRP406607	0.00
SRR22214424	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	266.42
SRR22214436	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	229.72
SRR22214442	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	156.65
SRR22214445	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	98.25
SRR22214439	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	96.80
SRR22214426	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	90.65
SRR22214441	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	71.00
SRR22214438	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	60.71
SRR22214430	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	59.21
SRR22214425	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	58.52
SRR22214434	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	49.86
SRR22214437	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	41.18
SRR22214429	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	31.42
SRR22214427	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214428	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214431	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214432	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214435	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214440	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214443	holobiont · low.pH Control.temp	holobiont	not recorded	low.pH Control.temp	SRP406607	0.00
SRR22214464	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	379.44
SRR22214458	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	284.19
SRR22214463	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	229.65
SRR22214448	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	219.86
SRR22214446	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	140.80
SRR22214454	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	137.66
SRR22214456	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	106.40
SRR22214462	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	81.82
SRR22214447	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	73.28
SRR22214459	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	57.09
SRR22214450	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	50.66
SRR22214465	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	46.25
SRR22214460	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	34.44
SRR22214449	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	0.00
SRR22214451	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	0.00
SRR22214452	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	0.00
SRR22214453	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	0.00
SRR22214457	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	0.00
SRR22214461	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	0.00
SRR22214467	holobiont · control.pH_high.temp	holobiont	not recorded	control.pH_high.temp	SRP406607	0.00
SRR22214468	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	223.12
SRR22214400	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	193.00
SRR22214547	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	176.21
SRR22214466	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	175.76
SRR22214535	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	112.30
SRR22214481	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	109.19
SRR22214471	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	108.38
SRR22214506	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	81.79
SRR22214548	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	69.61
SRR22214444	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	63.64
SRR22214411	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	51.99
SRR22214422	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	37.41
SRR22214433	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR22214455	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR22214469	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR22214470	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR22214492	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR22214524	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR22214546	holobiont · control.pH Control.temp	holobiont	not recorded	control.pH Control.temp	SRP406607	0.00
SRR14295600	Whole organism	Whole organism	not recorded	not recorded	SRP315757	3.23
SRR14295604	Whole organism	Whole organism	not recorded	not recorded	SRP315757	2.19
SRR14295603	Whole organism	Whole organism	not recorded	not recorded	SRP315757	1.51
SRR14295601	Whole organism	Whole organism	not recorded	not recorded	SRP315757	1.22
ERR12861049	unannotated	not recorded	not recorded	not recorded	ERP159209	1.82
SRR12454619	live coral tissue/skeleton	live coral tissue/skeleton	not recorded	not recorded	SRP277390	1.53

Source: CnidoSite RNA-seq expression matrices (SSIDE_TPM, StringTie quantification over 85 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.