Gene detail

Detailed information of FUN_006431-T1 in Dendrogyra cylindrus

Genomic Location: contig_7:2431332...2455818
NR annotation: XP_027049639.1, kelch domain-containing protein 2-like [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

FUN_006431-T1

ACATTGCGGTGGTAAAATTTATGCTTTGGTTCCTTCGCCTTCCGTCACATTTTATGTTCAGAGAGAAGTCTGTTTATAACCTGTAATTATCAATGCTGAGGAAATGACATTTGTATTCCCGTCCATAAATGGCACGGTGAAGCCAAGAGAAAGGAGTGGTCACGTAGCAGTTCATTGTAATGGCTATTTAGTGATCTGGGGAGGATACTATAACGGTGATCTTGAGGAACCGTTTCCTGGATTTCATTTTGTGGCTGACAAGTATCATCCAAGCAATGAGGTCTGGCTGTTCTGCATTGAGACCTCGTCATGGAAACACATTGAAACAAGTGGAGATTTACCCCCACCCATGTCAGGATCATCAGCTTGTGTCATTGAcagcaaatacatgtatgtgTTTGCTGGGCATTATGACGGTGGACCTTCTTCCATGgTTTTTGTTTTAGATTTAAAATCATTTGTGTGGCAAAATGTGACTGAAAGGATAAAAGGAAATCCTCCCTCGGATAGAGACAAGCTGTGTTGCTGGACTCACAATGACTTAATTTTCTATTTTGGAGGATATGGAGTAGCTCCTGACCCTGAGACAGTGGATGAGTCTGGTGGTTATTTCACATTTAACACTGGTTCTGAGGAACAGTTTATTGATAACAGAGGCTGGAACaatcatttgtttgttttggatacaAGTCATTTAACTTGGAGCCAACCAAAGACAAAGGGTAATGCTCCTACCCCAAGAGCAGCACAGGCTGCCGCTAAACTGGGAAATACTGCTTATATTTTTGGTGGAAGATATATGGAAAAACGGCGTAATGATTTGCACGCTCTTAATATGGACACTATGGAGTGGAGTGACAGTATACCCACAACAGGCAATGTTCCTGAAGGAAGAACATGGCATTCTCTCTCTGCTGCCAGTGACAAACATTTGTTTCTTTACGGAGGCTTCAACAATGAGGAAAAAGCATTAGATGATGCTTATATTTTGGACACTTTGACGATGATCTGGTTTCAATTGAAAGTTCCTTCTGTTCAAGGCTCACCAATGAGCCGTATGTGGCATACAGCTTGTAGTACGTCTTCACCTGGAGAAGTTCTTCTCTTTGGAGGTTGTGCTACGTCAGTACTAAGCCCTGAACCGGAACACATTGACAGTATCCTGATCTTTCGGTTTACACCTCAAGCTCTGAACTGGTTGTGTGCTGATACAGTTATCAAGTATTATTCAACCCTCCACAAGCAACTTCAGATGCTTCCAAAAAATCTTCTAATGTCACTTTTCCTGCACAGAAGACTACAGGCTATTGGAAAAACATAAATCTTATTTGAACTCATCATTTTTAGGAGACACATGCAATTAAGCTGTGTGACTGACCTCCATTAATCTCAGGATTAGACAAGCTAGGTTGCCCAAAGATTATACCCTCATGAGGGAGTTTTAAGTGAATTAATAGCTGTCTTGGTTAAAGAGAAGCACTGTAAGAGTGAGTTGTCCTGCCCAAGAATAGAACTCGAGGACTCTACTAGCTACAGGCTTGAGCACTGACTTACCCCTTGACCTGTTTGTTTGGCAATCATtaagttataataataataatagtaataataataataataataataataataataataataataataataataataataatgatgatgatgattatgacaataataataatattaataatagtaataataataataattaataataataataagtaaacgatgggaatttgcagtggcatttcCACACACTGTTCtctgatcgaattggaattcagaagtgttggtttttatgGAGAGAGGAAAAATGTgagaacccagagaaaaaccctaAGAGCAAGGAcaaaaaccaacaacaaacatGCACATATGATAGCGTTTCCAGGGAGTCAAACCTGGGCCACATCAAATTGGTGGGAGGGATGCAAGTGCTAAGAGTAGAGTATGGTATTGTAAGTAGTGCAAGTATCGTCTTGTGTGTTTAGCATTAGAAATTGTGTTGTAATTTTTCTTGAATTAccaattttaaaaagtgttctggcacgtttctttttttattacaaaCAATAAATTACAGTTGAACATCCCATGTGTTTGATCACCTCTTCAAAGATTTCGCAAGTGCAAAACCCCAAATTTCTCTCATGCAGTGTTTGAGATTTGTTCATAAAACAGCCACCTCCCATTAGTGATCTCCTTACTTAGACAACATAGGTGCTTCCCAGCAGGTTTCACACAATTGAACCCGCAGAGCCTGATTAAAATTATTGGGAAGATATACCTATTAAATGTAACTGAAGTTGTGTGGTAGTGCATGCTTGACTGCATAATATTGTAAATAAGAAATTTATCTGTAAATGTAATGCTAATGAATATTTACAGGTAGTTTCATCAAATTAAAGTTCAAAGGACCAGAGGAGTTTGAACAAAAAATCAACCTACAGAAAAGGAAATTAACCCTATATTTAGGAAATTGTACATGTACCTGAAAATGGTAATCgtatctataacaaaattctcgattttgattggttctctgCGCGCCTATTTGTCACATGATTGGCGCGTGATCATGTGGGTGTACAATTACAGCTGTCCATTTACAACTTCTAATAATTGGATAGCTGTAATTGGACATTCGCGCATCAATCACATGCACTTAaatgggttctttcttggtGTCTTCCTGctgttttaaggaggctcgcaacggtttcaagcgctttccagctcttaaactttgatgggtc

Protein

Uniprot

Uniprot term	Description
Q80YG3	Kelch domain-containing protein 1 OS=Mus musculus OX=10090 GN=Klhdc1 PE=2 SV=1
Q8N7A1	Kelch domain-containing protein 1 OS=Homo sapiens OX=9606 GN=KLHDC1 PE=1 SV=2
Q9MA55	Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=ACBP4 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13415	Kelch_3	Galactose oxidase, central domain	Repeat	Interproscan
PF13418	Kelch_4	Galactose oxidase, central domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052257	Family	Kelch domain-containing E3 ubiquitin-protein ligase complex component	Interproscan
IPR011043	Homologous_superfamily	Galactose oxidase/kelch, beta-propeller	Interproscan
IPR015915	Homologous_superfamily	Kelch-type beta propeller	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46228	KELCH DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K25807	KLHDC2; kelch domain-containing protein 2	-	Ubiquitin system	ko04121	deepkoala