Gene detail

Detailed information of FUN_006488-T1 in Acropora pulchra

Genomic Location: ptg000001l:13109256...13129960
NR annotation: XP_044179061.1, D-inositol 3-phosphate glycosyltransferase-like [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_006488-T1

ATGTCACAAGATGAACTATGTCAACAAGCAAGTGCAGTGCAGATTTCCCAAGGGCAAATATTAAACATTACTCTGCTAGCAAGTGAATGGAAGTCGACAGCAGATGGTTTGTCAACATTAAATAGGGAACTGGCAATTAATCTGTCACAGATACAAAATGTGAGAGTTTCTCTCTTTGTCCCCGAGGGTGCTTATAATGATGAAGACAAAATGGAGGCTAAAAGTTTTGACATCAGTATTCTTGACGCAAAGAAATATGTATGCAACCCACCTCAAGATCACAAAATAGATGTTATTGTTGGTCATGGTGTGAAACTTGGTCGTCAAGTACAACTCATTAAAAGAAGGGCACAATTCCAAAATTGCAAGTGGGTACATGTGGTCCATACTGCTTCAGGAGGCCTCAGCAAATACAAGGTTTATAGTGATCCAATTTCAAAAGGTGAAATAAAGCTCTGGGAAGAGGTTGATCTTTGCAAGAATGCTGACCTTATTGTTCCAGTGGGACCAAAGCTTAGAAAAGCTTATCATGGGTATTTGCAGGGAATTAAAAAAGATGAGGACTTTTTTGAGCTTATTCCTGGTCTTTTTGAGCGTGAGTTTGCGGATTTGCCTGCAAAGCAGAAACCCAAAGACAAGAGGGATGATTTCATTGTGTTGTTGTGTGGGCGTGGTGATAAGGAGGATTTTGAAGTTAAAGGGTACGACATTGCTGTTAAAGCCTTTGCTGATCAGAGGCTGAAGAGAAAAGATTACTCTTTGCTTTTTGTGGGTTCACCTGAAGGAAAGCAGGATGAGGTTCAGGAAAGGCTGCTCAGTTTTGGAATTGACATCGAACAGCTGACAGTGAGAGCGTTTGTGAAGAGAAGAGAAAGAATAAAGGAGCTTTTTTGTGAAGTGGACATGGTCATCATGCCTTCAAAATCAGAGGGATTTGGCCTTGTTGCCCTTGAAGCCCTGTCAGCTGGTTTACCCGTTCTTGTTGGGAGTAACTCAGGATTTGCAAGAGTAATAGAGAACATTCCACCTGGACCGTACAGTGTAGTTGATTCAGAAGATCCTTCTAAATGGGCTGAAGGGATTGAGGATGTCCGTGATAGACATAGGGTGGTCCTTCTGGAAACCAAAATGCTGAGAGAAAACTATAGCAAGAAGTACTGCTGGAAAACACAATGTGAAGAACTTGTTGACAGATTATGGAAGATGGTTTATGGTGAGGAAAGGCAGCCCTTTCCAAGGTTAGGTGAAATGCGACCAGCCTTACCTATCATACCGCCACTACCTAAAATCAGAAGTGGACAGGATGGAGCACAAGGGGAAAGTGAACTAATTACCACACCTGACTTAGCAAGTTCATTCACTCGTGTACCCAGATTTGAAGAAACTTTTGCTTCTGCACTAAGGGAACCACTGTCTCATGAAGCATCACCTGGAGAAGATTCCCATGAAACAGACTTCACCGTTGGTGGATCTGGTGTCACTAAACCTTTGCAAACCAGCACTTGGGTGACATCCTTGAGATCACGATTAGGCTTGGACAGAGATGGGGCCTTTCTAGATCCTGAGAAGTATGATCCAATCAAACGTTTGGGTTCTGGTGGATTTGCTAAGGTTTATATGGTAAGAGATAAGAGAACAGGTAAAATAACTGCTTGCAAGATGTTTGACCTTGGAGAAAATGATAAGCACATTCAAGAGAAAACAAAAAAGGTGGAGCAGGAAGTTAGAATTCTTTCTGCTCTAAAGCACAGATTTATAGTGGAGTTTGATCATACTGATCAGCGTCGCAGCACTTTTTTAATTTTCATGGAATGCATGGAAGGGGGCTCAGTGGCGAAGCTTTTAAATGAGAAAGGACCATTAGTGGAACCAATGGTCCAAATATTCACGAGGCAGTTGCTTGATGCAGTTGATTTTCTGCACAACAATCCTACCAAGCCTGTCATACACAAGGACATTAAAGGGGCTAATGTTCTGTTGGACAAACTTCAGAAAAACATAAAACTTACAGACTTTGGATTATGTACTGAAATGAATACATTGAAAACAGCCACAGGAGGATTTGTTACCAAAAACAACATTGCTTCATTCCTCTGGACAAGCCCTGAAATGCTGGCTAATAAGCCATTTGGAAGAAACACTGACATATGGAGTGTTGGTTGCACCGTTATAGAAATGCTGACTTCATGTCCGCCTTTAATGGATCCTGGAAATGAACACTTAACTAACAGCCAAAGAATGTATATCATTGAACACCGGGAACTTAAACCACCAGGTTCTTGCTCTTCTTTAGTTTGCCGATTCCTTAAACGATGTCTTAGTGACAGGAAGGAGCGCCCATCGGCTTCTGAATTGTTAAAGACTGATGATTTTGTGAAGTTCCTCTCTGACTGA

Transcript

FUN_006488-T1

GATTGTACAAACGGGGGTTGCAAGAGGATTGTTTCTCGGTTTCTTTCTATTTCCTGGGCTTTGTTATCATTCCTTTAAAGTTTGGAATATTTTGTAAGTATGGTTTCAATTCAAACACCGCAAATCAGTTCTCTTCAACCTATGATCGATTGTTGATTGCAGTTTTCACCATCAAGGAACGACACGAAAGTTTGTTCTGATTGGCTTTGAAATCATGTCACAAGATGAACTATGTCAACAAGCAAGTGCAGTGCAGATTTCCCAAGGGCAAATATTAAACATTACTCTGCTAGCAAGTGAATGGAAGTCGACAGCAGATGGTTTGTCAACATTAAATAGGGAACTGGCAATTAATCTGTCACAGATACAAAATGTGAGAGTTTCTCTCTTTGTCCCCGAGGGTGCTTATAATGATGAAGACAAAATGGAGGCTAAAAGTTTTGACATCAGTATTCTTGACGCAAAGAAATATGTATGCAACCCACCTCAAGATCACAAAATAGATGTTATTGTTGGTCATGGTGTGAAACTTGGTCGTCAAGTACAACTCATTAAAAGAAGGGCACAATTCCAAAATTGCAAGTGGGTACATGTGGTCCATACTGCTTCAGGAGGCCTCAGCAAATACAAGGTTTATAGTGATCCAATTTCAAAAGGTGAAATAAAGCTCTGGGAAGAGGTTGATCTTTGCAAGAATGCTGACCTTATTGTTCCAGTGGGACCAAAGCTTAGAAAAGCTTATCATGGGTATTTGCAGGGAATTAAAAAAGATGAGGACTTTTTTGAGCTTATTCCTGGTCTTTTTGAGCGTGAGTTTGCGGATTTGCCTGCAAAGCAGAAACCCAAAGACAAGAGGGATGATTTCATTGTGTTGTTGTGTGGGCGTGGTGATAAGGAGGATTTTGAAGTTAAAGGGTACGACATTGCTGTTAAAGCCTTTGCTGATCAGAGGCTGAAGAGAAAAGATTACTCTTTGCTTTTTGTGGGTTCACCTGAAGGAAAGCAGGATGAGGTTCAGGAAAGGCTGCTCAGTTTTGGAATTGACATCGAACAGCTGACAGTGAGAGCGTTTGTGAAGAGAAGAGAAAGAATAAAGGAGCTTTTTTGTGAAGTGGACATGGTCATCATGCCTTCAAAATCAGAGGGATTTGGCCTTGTTGCCCTTGAAGCCCTGTCAGCTGGTTTACCCGTTCTTGTTGGGAGTAACTCAGGATTTGCAAGAGTAATAGAGAACATTCCACCTGGACCGTACAGTGTAGTTGATTCAGAAGATCCTTCTAAATGGGCTGAAGGGATTGAGGATGTCCGTGATAGACATAGGGTGGTCCTTCTGGAAACCAAAATGCTGAGAGAAAACTATAGCAAGAAGTACTGCTGGAAAACACAATGTGAAGAACTTGTTGACAGATTATGGAAGATGGTTTATGGTGAGGAAAGGCAGCCCTTTCCAAGGTTAGGTGAAATGCGACCAGCCTTACCTATCATACCGCCACTACCTAAAATCAGAAGTGGACAGGATGGAGCACAAGGGGAAAGTGAACTAATTACCACACCTGACTTAGCAAGTTCATTCACTCGTGTACCCAGATTTGAAGAAACTTTTGCTTCTGCACTAAGGGAACCACTGTCTCATGAAGCATCACCTGGAGAAGATTCCCATGAAACAGACTTCACCGTTGGTGGATCTGGTGTCACTAAACCTTTGCAAACCAGCACTTGGGTGACATCCTTGAGATCACGATTAGGCTTGGACAGAGATGGGGCCTTTCTAGATCCTGAGAAGTATGATCCAATCAAACGTTTGGGTTCTGGTGGATTTGCTAAGGTTTATATGGTAAGAGATAAGAGAACAGGTAAAATAACTGCTTGCAAGATGTTTGACCTTGGAGAAAATGATAAGCACATTCAAGAGAAAACAAAAAAGGTGGAGCAGGAAGTTAGAATTCTTTCTGCTCTAAAGCACAGATTTATAGTGGAGTTTGATCATACTGATCAGCGTCGCAGCACTTTTTTAATTTTCATGGAATGCATGGAAGGGGGCTCAGTGGCGAAGCTTTTAAATGAGAAAGGACCATTAGTGGAACCAATGGTCCAAATATTCACGAGGCAGTTGCTTGATGCAGTTGATTTTCTGCACAACAATCCTACCAAGCCTGTCATACACAAGGACATTAAAGGGGCTAATGTTCTGTTGGACAAACTTCAGAAAAACATAAAACTTACAGACTTTGGATTATGTACTGAAATGAATACATTGAAAACAGCCACAGGAGGATTTGTTACCAAAAACAACATTGCTTCATTCCTCTGGACAAGCCCTGAAATGCTGGCTAATAAGCCATTTGGAAGAAACACTGACATATGGAGTGTTGGTTGCACCGTTATAGAAATGCTGACTTCATGTCCGCCTTTAATGGATCCTGGAAATGAACACTTAACTAACAGCCAAAGAATGTATATCATTGAACACCGGGAACTTAAACCACCAGGTTCTTGCTCTTCTTTAGTTTGCCGATTCCTTAAACGATGTCTTAGTGACAGGAAGGAGCGCCCATCGGCTTCTGAATTGTTAAAGACTGATGATTTTGTGAAGTTCCTCTCTGACTGACAGATTAATCCACTACCTCTTAATGTGATCACGGTTACTGGAGTGGATTTGATTCTTTTTTTTGCCTTAACTCTTGAGAGATTGTCACATTTATCGATCAGCGGTCTTCTACGATCATACCTTGTTGAAATGATGAAAAATTCCAGCTCAGTAACAGCGACCAGTGGATAAGCCTGCTCTCACGTATTAAACACATGGAAAATTTTACAAAGTGTTTAGCCGAAAGTCGAAATCTCATTGAACAGGATTATATGAAGCGGCCCTATGAGTGCGCTTGCATGTAACAATCATTGATGAAAACAAGACCTCAAGAGTGACAGGTTGGAATGGTCCACCGCAGTTTTCAGTAAAAATGGAGCATTCCTTTAAAGGTTGTCACCATTTTTTCCCTAGATTTATTAGCGAGCAGGCGGGTTTGTTCGGATTACATTGCTGCTTCAGGGGGAAGACAACTGTGAAATTTAGGATTATAAGGGGCGTGGTCAAGCAATCCTCAAATCACCTAAAGTCCCAAAACTGAAACGGGATTTATAATATCGCAGTAACCTTTGATATGAATTAGTATGAGCAAAGACTCAAGTTTTCACCGCAGTGCGCATTCTCGTCTTGACGCGTTGTGTTTTTAAGTCCACAATTATAAAAATTTACCTCAATGAAATGTGAGATTCCTTAACTCTGGAAATATTTCACTCCAGAGTGCGCACTGCGGTGCATTAAAAGTTTCCTTTTTTATGTACTTTTGCCTTGCCAAGTTTGAAATCCATACGATATATATCGTTGCAAAGTAAGAGTAGAAAATATAGCGCCCTATCATAGCTTATTCGATTGTTGTAGCCTTAAATCGGCCATAAATTTCGCACAAAGGGTAGAAAAGCTGATCATTTTATACATAAAGTAATATCTTCATGTTTCGATGATATAATTATGTTGACGTATTTCTGCATTACTACATCTAAGCATGTTAAAACGCACTGTATGCAAGGCCAATTGCAATAAAGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9Y2U5	Mitogen-activated protein kinase kinase kinase 2 OS=Homo sapiens OX=9606 GN=MAP3K2 PE=1 SV=2
Q61083	Mitogen-activated protein kinase kinase kinase 2 OS=Mus musculus OX=10090 GN=Map3k2 PE=1 SV=2
Q99759	Mitogen-activated protein kinase kinase kinase 3 OS=Homo sapiens OX=9606 GN=MAP3K3 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000025 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan
PF20706 all species →	GT4-conflict	Family 4 Glycosyltransferase in conflict systems	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR050538 all species →	Family	Mitogen-activated protein kinase kinase kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48016 all species →	MAP KINASE KINASE KINASE SSK2-RELATED-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10798	PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4	EC:2.4.2.30	DNA repair and recombination proteins	ko03400	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.