Detailed information of FUN_006526-T1 in Acropora pulchra

Genomic Location: ptg000001l:13623925...13631730
NR annotation: XP_044183408.1, LOW QUALITY PROTEIN: NLR family CARD domain-containing protein 3-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q2LKU9NACHT, LRR and PYD domains-containing protein 1a OS=Mus musculus OX=10090 GN=Nlrp1a PE=1 SV=1
Q2LKV5NACHT, LRR and PYD domains-containing protein 1b allele 3 OS=Mus musculus OX=10090 GN=Nlrp1b PE=1 SV=1
Q2LKW6NACHT, LRR and PYD domains-containing protein 1b allele 1 OS=Mus musculus OX=10090 GN=Nlrp1b PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000025 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13516
all species →		LRR_6Leucine Rich repeatRepeatInterproscan
PF00531
all species →		DeathDeath domainDomainInterproscan
PF05729
all species →		NACHTNACHT domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR000488
all species →		DomainDeath domainInterproscan
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR052201
all species →		FamilyLeucine-rich repeat-containing regulator of pluripotencyInterproscan
IPR007111
all species →		DomainNACHT nucleoside triphosphataseInterproscan
IPR011029
all species →		Homologous_superfamilyDeath-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24111
all species →		LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0007165
all species →		Biological Processsignal transductionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_006526-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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