Detailed information of FUN_006582-T1 in Acropora pulchra

Genomic Location: ptg000001l:14396031...14413442
NR annotation: XP_044176418.1, hemicentin-1-like [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P98160Basement membrane-specific heparan sulfate proteoglycan core protein OS=Homo sapiens OX=9606 GN=HSPG2 PE=1 SV=4
Q96RW7Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2
Q8WZ42Titin OS=Homo sapiens OX=9606 GN=TTN PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000349 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07679
all species →		I-setImmunoglobulin I-set domainDomainInterproscan
PF13895
all species →		Ig_2Immunoglobulin domainDomainInterproscan
PF07686
all species →		V-setImmunoglobulin V-set domainDomainInterproscan
PF00047
all species →		igImmunoglobulin domainDomainInterproscan
PF01607
all species →		CBM_14Chitin binding Peritrophin-A domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036508
all species →		Homologous_superfamilyChitin binding domain superfamilyInterproscan
IPR013098
all species →		DomainImmunoglobulin I-setInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003599
all species →		DomainImmunoglobulin subtypeInterproscan
IPR036179
all species →		Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan
IPR003598
all species →		DomainImmunoglobulin subtype 2Interproscan
IPR013106
all species →		DomainImmunoglobulin V-set domainInterproscan
IPR013151
all species →		DomainImmunoglobulinInterproscan
IPR051170
all species →		FamilyNeural and epithelial cell adhesion domain-containing proteinInterproscan
IPR002557
all species →		DomainChitin binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12231
all species →		CTX-RELATED TYPE I TRANSMEMBRANE PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008061
all species →		Molecular Functionchitin bindingInterproscan
GO:0005576
all species →		Cellular Componentextracellular regionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_006582-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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