Gene detail

Detailed information of FUN_006636-T1 in Acropora pulchra

Genomic Location: ptg000001l:14991709...15008706
NR annotation: XP_015758049.1, PREDICTED: kinesin-like protein FLA10 isoform X2 [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_006636-T1

ATGACTTCTGGAGGAACAAATGTTCGAGTTGCAGCTCGCTGCAGACCTTTCAATGATAGCGAAAAGGCCAGAGCTGCAACAAGAGTTGTAAAAATGAGTGCTGAGAAAACAGTGATACATAACCCACATCCTGGAACAAATACCAAGGAGCATGCATTTAGCTTGGATCACAGCTATTTTTGGGACACAAAAACTGAACAAATTTTTCATGATCTTGGTGCTCCTTTATTGAAGAAAGCTTTTGAAGGCTTCAATGTCACTATGTATGCATATGGCCAGACAGGTACTGGAAAAACACATACCATGATAGGGACAGAAGAGGAACCTGGTATTATTCCCTTGCTAAATCAAGGTCTCTTCAAGTTTATTGATGAAGCTCCTCCAAATAAACAATTTTTCATCACAGTTTCATTCTATGAGATCTTTCAAGAAATGATCCATGACTTACTTAATCCCACTGGTCAAGATTTACGAGTTCGTCAGCATCCACAATTAGGAATTTTCATTGAGGGTCTTGCAGAGTTGGTAGTTCAAAACAAAGAAGACATTGCTCGTCTTTTTGAGCAAGGAAACAGAGTGAGAAAGATGGCATCAGTGGATAAGAACTCTGGTGGAACAAAGTCTGATTGTGTGTTCACCATTCATGTTGAGCAAAAGAGTAAAAGAGAATCAAATGAAAATGGAATCAGATCCAAGATAGTACTGATTGATATGGCAGGATCTGAAAGGATGGAGGGTGTAGATCTCAACATCCAGAGCGAAGGAGGTCATATCAACAAAGGAATAAGTGCCCTGAATGCTGTAGTGAGCGCCTTAGCCGATCCCAAGAAAAAAGAAGGCCACATTCCTTATAGAGACTCCAAACTGACAAGGATCTTGCAGGATTCCCTAGGAGGTAGTGCATACACAGCGATGATCACAACAGTGTCGCCAGCAGACTCTGATTATGAGGAGACCCTAGCCGCTATGCAGTGTGCCAATAGGACAAAACTGATTGAAAATGCAATTAAAGCAAATGAGATGGAAAACACGAAGATCATCCAAGATTTGAGAGACGAAATTTCACGATTGAGAGAAAAGTTAGCCACCACTGGGCGAGCGGGCGGAGCAAACAAGGATGATGTTCTTCAAATGGAAGAGCTGATAAAGGATCTTCAGACAGCCAAGAGGCAAACTTGGGAAGAACGAGAAAGATTATCTGAACATTATGATGAAGAGCGGAACATAACGCTAGCAAATAAGGGAATTTTGGACTGGGTAATGGACAGTACGAAGAGAGACAACAAGGAAGTACAAGAAAAGTTGATGGCCCTTCAAAAGGAGAAAGACCAGCTGACTGCCGAGTTCAAAGAAAAGCGACGGCTTGTAGATGAGTTGAAAGATGACCTGCAATCGAAAATCGCTGACTACTCACAGATGGCAGAATCAGGAAGGAGCAGCGAAGAAGAGAACAAGGCCAGGGTATCTGCCATTCATGATCTGAAAGAAAAACTCAAGAGCGAGAATGAAGAGTTAAAGAAGATTAAACACGAACTGAAAGATGTGCAAGAAAAACAGAAAGCCGAAAAAGAGGAAGCGAAGTCTCAAACCACTTACTTGAAAGGAAATGCTGAGTTGCGTTACAGGATTGAGAGTGAACGACGCGAAAAACACGAGAAAGAAAATGCCGCAACATTGGCGGATGAAGTGGACCGGGTTAAGATGGAATTGGAGCAGGAAAAAGCTGAGCTGCAGTTGAAAGCTGCCGAAGGAGCACAATACAGTACTGATCAGGCGATCAAACTCGAAATGGAACTGGTCGAGATGAAAGCGGAACGCACAGTCATGTCGCTGAGGATCCAATCTGTAACAGAGGAGAAAAAGCGCTTAAAGACCGATCTAGAAGAAGCTTACAAAAGGCACAAGGAAGAATTGGAAATTCAACAATTGCAGCATTTTCAGACGTTCCGTAATTATCGAGAAGTGTTCGAAGATCAGAAGTCGGCCATCGAGCAGCGCTACCGGTCACTACTGGAAGAGGCCATACAAGATGCTGTGTTTTTATCCACAAGAAACCAGGAGCTCATGCACGAAAACCAAGCTTTGAAACAAGAAATTGCCGAGTTAAAAGATCAAGTGTCACTCGGAGGATCTAAAGTGGACGTTTCTTAA

Transcript

FUN_006636-T1

TTACTGATTTGCGTCAAATTCCTGAATCACACAAAAAATACGAAAATGACTTCTGGAGGAACAAATGTTCGAGTTGCAGCTCGCTGCAGACCTTTCAATGATAGCGAAAAGGCCAGAGCTGCAACAAGAGTTGTAAAAATGAGTGCTGAGAAAACAGTGATACATAACCCACATCCTGGAACAAATACCAAGGAGCATGCATTTAGCTTGGATCACAGCTATTTTTGGGACACAAAAACTGAACAAATTTTTCATGATCTTGGTGCTCCTTTATTGAAGAAAGCTTTTGAAGGCTTCAATGTCACTATGTATGCATATGGCCAGACAGGTACTGGAAAAACACATACCATGATAGGGACAGAAGAGGAACCTGGTATTATTCCCTTGCTAAATCAAGGTCTCTTCAAGTTTATTGATGAAGCTCCTCCAAATAAACAATTTTTCATCACAGTTTCATTCTATGAGATCTTTCAAGAAATGATCCATGACTTACTTAATCCCACTGGTCAAGATTTACGAGTTCGTCAGCATCCACAATTAGGAATTTTCATTGAGGGTCTTGCAGAGTTGGTAGTTCAAAACAAAGAAGACATTGCTCGTCTTTTTGAGCAAGGAAACAGAGTGAGAAAGATGGCATCAGTGGATAAGAACTCTGGTGGAACAAAGTCTGATTGTGTGTTCACCATTCATGTTGAGCAAAAGAGTAAAAGAGAATCAAATGAAAATGGAATCAGATCCAAGATAGTACTGATTGATATGGCAGGATCTGAAAGGATGGAGGGTGTAGATCTCAACATCCAGAGCGAAGGAGGTCATATCAACAAAGGAATAAGTGCCCTGAATGCTGTAGTGAGCGCCTTAGCCGATCCCAAGAAAAAAGAAGGCCACATTCCTTATAGAGACTCCAAACTGACAAGGATCTTGCAGGATTCCCTAGGAGGTAGTGCATACACAGCGATGATCACAACAGTGTCGCCAGCAGACTCTGATTATGAGGAGACCCTAGCCGCTATGCAGTGTGCCAATAGGACAAAACTGATTGAAAATGCAATTAAAGCAAATGAGATGGAAAACACGAAGATCATCCAAGATTTGAGAGACGAAATTTCACGATTGAGAGAAAAGTTAGCCACCACTGGGCGAGCGGGCGGAGCAAACAAGGATGATGTTCTTCAAATGGAAGAGCTGATAAAGGATCTTCAGACAGCCAAGAGGCAAACTTGGGAAGAACGAGAAAGATTATCTGAACATTATGATGAAGAGCGGAACATAACGCTAGCAAATAAGGGAATTTTGGACTGGGTAATGGACAGTACGAAGAGAGACAACAAGGAAGTACAAGAAAAGTTGATGGCCCTTCAAAAGGAGAAAGACCAGCTGACTGCCGAGTTCAAAGAAAAGCGACGGCTTGTAGATGAGTTGAAAGATGACCTGCAATCGAAAATCGCTGACTACTCACAGATGGCAGAATCAGGAAGGAGCAGCGAAGAAGAGAACAAGGCCAGGGTATCTGCCATTCATGATCTGAAAGAAAAACTCAAGAGCGAGAATGAAGAGTTAAAGAAGATTAAACACGAACTGAAAGATGTGCAAGAAAAACAGAAAGCCGAAAAAGAGGAAGCGAAGTCTCAAACCACTTACTTGAAAGGAAATGCTGAGTTGCGTTACAGGATTGAGAGTGAACGACGCGAAAAACACGAGAAAGAAAATGCCGCAACATTGGCGGATGAAGTGGACCGGGTTAAGATGGAATTGGAGCAGGAAAAAGCTGAGCTGCAGTTGAAAGCTGCCGAAGGAGCACAATACAGTACTGATCAGGCGATCAAACTCGAAATGGAACTGGTCGAGATGAAAGCGGAACGCACAGTCATGTCGCTGAGGATCCAATCTGTAACAGAGGAGAAAAAGCGCTTAAAGACCGATCTAGAAGAAGCTTACAAAAGGCACAAGGAAGAATTGGAAATTCAACAATTGCAGCATTTTCAGACGTTCCGTAATTATCGAGAAGTGTTCGAAGATCAGAAGTCGGCCATCGAGCAGCGCTACCGGTCACTACTGGAAGAGGCCATACAAGATGCTGTGTTTTTATCCACAAGAAACCAGGAGCTCATGCACGAAAACCAAGCTTTGAAACAAGAAATTGCCGAGTTAAAAGATCAAGTGTCACTCGGAGGATCTAAAGTGGACGTTTCTTAACATTCATTCATGAAAATCGCGTTTTCATTTATTTTCGTGGTTTACTCTTCAGATTGTTGTTTTATTTGTTATAAGTGTTTTCCTAGGAGGTGCGCTGTAACGACCTATTTATGAGAAATTCGTGACCAAGGTAGATAGAAAGATCCAAATGACTGTCCTTTTTGAACGGAAAAAACGAAAGAAACTTTTTTAGAGAGAGGGAGAGAGCTAGTCTTTTTACTCCGATCTTTCGCGCGCTTTTTACAGTTTTACTTTTCCCGAGACTCACCCAATGCATACGAAGTGAGATGTTAAGACTTAGAGCAGAACCGCGCTGGCGCTAACAAACCCGTAATATGGGCTAATAAATTTTTAATACCAAAATGGCCGTTTTATCAGGAGAAGCAGCTGAAGCTATTTTCGAAATGCCGAGATGGACAACCCCTCAGAAATATCAAGCTGGCGTAGATGTTATGCATTTCTCGCAGAGGATAGCACGCCTACTTCTGCCAATCTCTCAAATTTAATTTGAGTTTTACCAAGTACTAACTGGTAGCATAATCTGTAGTGAAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q12756	Kinesin-like protein KIF1A OS=Homo sapiens OX=9606 GN=KIF1A PE=1 SV=2
F1M4A4	Kinesin-like protein KIF1A OS=Rattus norvegicus OX=10116 GN=Kif1a PE=1 SV=3
P33173	Kinesin-like protein KIF1A OS=Mus musculus OX=10090 GN=Kif1a PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006331 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00225 all species →	Kinesin	Kinesin motor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001752 all species →	Domain	Kinesin motor domain	Interproscan
IPR027640 all species →	Family	Kinesin-like protein	Interproscan
IPR036961 all species →	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47969 all species →	CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003777 all species →	Molecular Function	microtubule motor activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0007018 all species →	Biological Process	microtubule-based movement	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan
GO:0005875 all species →	Cellular Component	microtubule associated complex	Interproscan
GO:0007052 all species →	Biological Process	mitotic spindle organization	Interproscan
GO:0051231 all species →	Biological Process	spindle elongation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_006636-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.