Gene detail

Detailed information of FUN_006683-T1 in Dendrogyra cylindrus

Genomic Location: contig_7:7164629...7183047
NR annotation: XP_020632866.1, LOW QUALITY PROTEIN: pre-mRNA-splicing factor SLU7-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q5U3F2	Pre-mRNA-splicing factor SLU7 OS=Danio rerio OX=7955 GN=slu7 PE=2 SV=1
Q8BHJ9	Pre-mRNA-splicing factor SLU7 OS=Mus musculus OX=10090 GN=Slu7 PE=1 SV=1
Q3ZBE5	Pre-mRNA-splicing factor SLU7 OS=Bos taurus OX=9913 GN=SLU7 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF11708	Slu7	Pre-mRNA splicing Prp18-interacting factor	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039974	Family	Pre-mRNA-splicing factor SLU7	Interproscan
IPR021715	Domain	Pre-mRNA-splicing factor SLU7 domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12942	STEP II SPLICING FACTOR SLU7	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000398	Biological Process	mRNA splicing, via spliceosome	Interproscan
GO:0005681	Cellular Component	spliceosomal complex	Interproscan
GO:0008380	Biological Process	RNA splicing	Interproscan
GO:0030628	Molecular Function	pre-mRNA 3'-splice site binding	Interproscan