Detailed information of FUN_006728-T1 in Acropora pulchra

Genomic Location: ptg000001l:15959523...15968244
NR annotation: XP_015776119.1, PREDICTED: beta-sarcoglycan-like isoform X1 [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006366 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04790
all species →		Sarcoglycan_1Sarcoglycan complex subunit proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006875
all species →		FamilySarcoglycan complex subunit proteinInterproscan
IPR027659
all species →		FamilyBeta-sarcoglycanInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21142
all species →		SARCOGLYCANSInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016012
all species →		Cellular Componentsarcoglycan complexInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0007517
all species →		Biological Processmuscle organ developmentInterproscan
GO:0042383
all species →		Cellular ComponentsarcolemmaInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_006728-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP