Detailed information of FUN_006800-T1 in Acropora pulchra

Genomic Location: ptg000001l:16765432...16767608
NR annotation: XP_022797143.1, sequestosome-1-like isoform X2 [Stylophora pistillata]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003508 (this species only)
Ubiquitin familyULD|UFD|PB1 · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00564
all species →		PB1PB1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR052260
all species →		FamilyAutophagy Receptor and Signaling RegulatorInterproscan
IPR000270
all species →		DomainPB1 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15090
all species →		SEQUESTOSOME 1-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000423
all species →		Biological ProcessmitophagyInterproscan
GO:0005080
all species →		Molecular Functionprotein kinase C bindingInterproscan
GO:0007032
all species →		Biological Processendosome organizationInterproscan
GO:0016235
all species →		Cellular ComponentaggresomeInterproscan
GO:0035973
all species →		Biological ProcessaggrephagyInterproscan
GO:0044753
all species →		Cellular ComponentamphisomeInterproscan
GO:0070530
all species →		Molecular FunctionK63-linked polyubiquitin modification-dependent protein bindingInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_006800-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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