Detailed information of FUN_006843-T1 in Acropora pulchra

Genomic Location: ptg000001l:17292515...17298439
NR annotation: XP_029181425.2, testican-2-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007409 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00086
all species →		Thyroglobulin_1Thyroglobulin type-1 repeatDomainInterproscan
PF10591
all species →		SPARC_Ca_bdgSecreted protein acidic and rich in cysteine Ca binding regionDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000716
all species →		DomainThyroglobulin type-1Interproscan
IPR036857
all species →		Homologous_superfamilyThyroglobulin type-1 superfamilyInterproscan
IPR011992
all species →		Homologous_superfamilyEF-hand domain pairInterproscan
IPR018247
all species →		Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR019577
all species →		DomainSPARC/Testican, calcium-binding domainInterproscan

 PANTHER
No PANTHER signature was recorded for FUN_006843-T1 in Acropora pulchra.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_006843-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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