Detailed information of FUN_006906-T1 in Acropora pulchra

Genomic Location: ptg000001l:18122654...18141774
NR annotation: XP_044176212.1, LOW QUALITY PROTEIN: uncharacterized protein LOC114959848 [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q28670Aggrecan core protein OS=Oryctolagus cuniculus OX=9986 GN=ACAN PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000310 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12661
all species →		hEGFHuman growth factor-like EGFDomainInterproscan
PF01390
all species →		SEASEA domainFamilyInterproscan
PF00008
all species →		EGFEGF-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001881
all species →		DomainEGF-like calcium-binding domainInterproscan
IPR013032
all species →		Conserved_siteEGF-like, conserved siteInterproscan
IPR000082
all species →		DomainSEA domainInterproscan
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR009030
all species →		Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR051355
all species →		FamilyNotch and Slit guidance proteinInterproscan
IPR018097
all species →		Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000152
all species →		PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45836
all species →		SLIT HOMOLOGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0007219
all species →		Biological ProcessNotch signaling pathwayInterproscan
GO:0007411
all species →		Biological Processaxon guidanceInterproscan
GO:0009986
all species →		Cellular Componentcell surfaceInterproscan
GO:0043235
all species →		Cellular Componentreceptor complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_006906-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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