Gene detail

Detailed information of FUN_006945-T1 in Acropora pulchra

Genomic Location: ptg000001l:18656303...18661412
NR annotation: XP_015751152.1, PREDICTED: protein boule-like isoform X2 [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O57437	Deleted in azoospermia-like-A OS=Xenopus laevis OX=8355 GN=dazl-a PE=1 SV=1
Q4V7Y4	Deleted in azoospermia-like-B OS=Xenopus laevis OX=8355 GN=dazl-b PE=2 SV=2
Q76CY5	Deleted in azoospermia-like OS=Xenopus tropicalis OX=8364 GN=dazl PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000963 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076 all species →	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000504 all species →	Domain	RNA recognition motif domain	Interproscan
IPR012677 all species →	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR035979 all species →	Homologous_superfamily	RNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11176 all species →	BOULE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0003730 all species →	Molecular Function	mRNA 3'-UTR binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0008494 all species →	Molecular Function	translation activator activity	Interproscan
GO:0045948 all species →	Biological Process	positive regulation of translational initiation	Interproscan
GO:0070935 all species →	Biological Process	3'-UTR-mediated mRNA stabilization	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24979	BOLL; protein boule-like	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.