Detailed information of FUN_007012-T1 in Acropora pulchra

Genomic Location: ptg000001l:19291025...19296119
NR annotation: XP_029193800.2, exosome complex exonuclease RRP44-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9Y2L1Exosome complex exonuclease RRP44 OS=Homo sapiens OX=9606 GN=DIS3 PE=1 SV=2
Q9CSH3Exosome complex exonuclease RRP44 OS=Mus musculus OX=10090 GN=Dis3 PE=1 SV=4
Q17632Probable exosome complex exonuclease RRP44 OS=Caenorhabditis elegans OX=6239 GN=dis-3 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001458 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00773
all species →		RNBRNB domainDomainInterproscan
PF17215
all species →		Rrp44_S1S1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012340
all species →		Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR022966
all species →		Conserved_siteRibonuclease II/R, conserved siteInterproscan
IPR001900
all species →		DomainRibonuclease II/RInterproscan
IPR050180
all species →		FamilyRNR RibonucleaseInterproscan
IPR033770
all species →		DomainExosome complex exonuclease RRP44, S1 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23355
all species →		RIBONUCLEASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0004540
all species →		Molecular FunctionRNA nuclease activityInterproscan
GO:0000175
all species →		Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0000176
all species →		Cellular Componentnuclear exosome (RNase complex)Interproscan
GO:0000177
all species →		Cellular Componentcytoplasmic exosome (RNase complex)Interproscan
GO:0004519
all species →		Molecular Functionendonuclease activityInterproscan
GO:0016075
all species →		Biological ProcessrRNA catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_007012-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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