Gene detail

Detailed information of FUN_007016-T1 in Dendrogyra cylindrus

Genomic Location: contig_8:3404118...3415992
NR annotation: KAJ7358732.1, hypothetical protein OS493_021507 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

FUN_007016-T1

ATGAATGATGTTTCAATTCAACTttgtggtggttgtgggagttgtgttggttgtgggggttgtgttggttgtgggtcagttgtgctggttgtgggagttgtgttggttgtgggagttgtgttggttgtgggggttgtgttagttgtgctggttgtgggagttgtgttggttgtgggagttgtgttggttgtgttggttgtgctggttgtgggagttgtgctggttgtgggggttgtgctggttgtgggggttgtgttggttgtgggagttgtgttggttgtgggagttgtgttggttgtgggggttgtgttagttgtgctggttgtgggagttgtgttggttgtgggagttgtgttggttgtgttggttgtgctggttgtgggagttgtgctggttgtgggggttgtgctggttgtgggggttgtgttggttgtgggagttgtgttggttgtgggagttgtgttggttgtgggggttgtgctggttgtgggagttgtgttggttgtgggagttgtgttggttgtgggggttgtgctggttgtgggggttgtgttggttgtgggggttgtgctggttgtgggggttgtgggagttgtgatggttgtgggggttgtgttggttgtgggagttgtgctggttgtgggggttgtgctggttgagggggttgtgggagttgtgtgggttgtgggggttgtgttggttgtgggagttgggttggttgtgggagttgtgctggttgtgggagttgtgggggttgtgctggttgtgggagttgtgctggttgtgggagttgtgttggttgtgggagttgtgagAGTTAAGTACTCTGGAACAAAGTCTTATGACAAAACGTTTAAAGATGAAGGTGTCAAAAAAGCTGGAAAAACAACAGCATATATAGTGAGAAGTCTAGTGCCAGGCTCTAAATACACGTTCGAGCTTTATGGAACTTCTGTTTGTGGAAAGAGCATATCCAGATATGCAACTAAGGAAACAAAAGTGGAGGCTCCCATTGGTCCAGATGTACTTACTTTTACCAATTTGACGGTCTCTGAATCAGTTGCTGGAATTTATCTGTGGCCTGCAGAACAAAGGAATGGTCCAATAAGTGCTTATCAAGTGATAGTTCTAAGAGTAACTGGTGGTGCTGAAAAGCTTCCAGATGATTATGATTCAAAACTGAAAGATAATGCCAACAAAGATAACTTGAACTTTTACATCGCTGCTGAGATAGAAAATGATCCAATACATGAGAAATCTTGGGAATTTACTGTTGGTGATGACCGGGAGTATGGAACGTATGTAAACAAAGGACTTGAGAGAGGAGAAAAGTATATTGTGTTCCAAAGGGCTGTAACTCGTGACAAGGACGAAATTTTAGAAGGAGTTACCATAAAGGTTGCCAAACTTTCCGTCACTCCTAAAGATGTTGGAACAAAAGACAAATCCCAAGGTTCTGGTTCGAGTAATGTAGCAGCCATTGTCGTGCCTGTTGTCCTTTTGCTACTCATTATACCAGCACTTGCTGTTGCATTGCTTTTCTATCGCAGGAGGAGGCAGTCAGAAACGAAAACCAACAGCAGGACTCCTGTTGAACTTGATAACATAAATGATTCACCAGATATCAGTGGAATTACCTCAAATCTGGTTTATCAGAATGTAGCTGAAATTCAGCGACCTGCAAAAGATGTTAAAGAAGCATCTCCCCCAGAAGAGAACGAAGCTCTCTACGGCAATGTTGACGCTGAAGATGGTAAACCCAAACCAATTCCCGTGGCTGAGTTTGCGAAATACTTCAAGAACAAGTCAAGCAATGGAGCAATTGTGCTGCGAGAGGAATTTAAGAATTTACCGGGAGGAATGCAGTTTCCATGGGAAATTGGGAAGAATAACAGAGTGAAGAACCGTTATGGCAACATTGTCTCTTATGACCATTCTCGTGTTGTGTTGGAGAAAATACAAAATGACCCAAAGTCTGACTACATCAACGCTAGTTACATTCCGACATATGATGAGGTATCAATGTGTTATATCGCCACTCAAGGTCCAACTTCTACAACGATCAGCGATTTCTGGCGAATGATCTGGCAGGAGAACTGTCTTAGTATTGTTATGCTAACCAACCTGGTTGAGCAAGGAAAGGTATGCTCTTTTTGGTGCAGGCCAAACCAGTGTGAGAGAAGCGTAGCCAGAGTTTAA

Transcript

FUN_007016-T1

Protein

Uniprot

Uniprot term	Description
P28828	Receptor-type tyrosine-protein phosphatase mu OS=Mus musculus OX=10090 GN=Ptprm PE=1 SV=2
P28827	Receptor-type tyrosine-protein phosphatase mu OS=Homo sapiens OX=9606 GN=PTPRM PE=1 SV=2
Q15262	Receptor-type tyrosine-protein phosphatase kappa OS=Homo sapiens OX=9606 GN=PTPRK PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00102	Y_phosphatase	Protein-tyrosine phosphatase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000242	Domain	Tyrosine-specific protein phosphatase, PTPase domain	Interproscan
IPR050713	Family	Receptor-type Tyrosine-protein Phosphatases/Ushers	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR029021	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46957	CYTOKINE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004725	Molecular Function	protein tyrosine phosphatase activity	Interproscan
GO:0006470	Biological Process	protein dephosphorylation	Interproscan
GO:0043235	Cellular Component	receptor complex	Interproscan
GO:1990264	Biological Process	peptidyl-tyrosine dephosphorylation involved in inactivation of protein kinase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan