Gene detail

Detailed information of FUN_007104-T1 in Acropora pulchra

Genomic Location: ptg000001l:20524333...20536711
NR annotation: XP_015763121.1, PREDICTED: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

FUN_007104-T1

GGTCCTTTTTTTCTGAGTCCATTGAGTTCAGGCTAATTTTATTATTACCAAGAAGGAGGTCTCCATGGGAAAATCTTGACCAAAGTTACCAGTGCTGACCAAACGCAGTCAATTTTTTTGTAATTCTGTGCCAGCAAAAATATAAACTAATGTTTTGCCTTTGCTCGTGAATTGCTGATGTCAAATTTGCCCTTGTTTCTTCATTCCCTTACCTTCTTTGTATTTAAGGTGCAATGTTCCTGTTGCAACTTTACAAGTTTACTTTGCAACTTTGACTAATGATGTAGCTTAATTTTACGAAAAGAAACAAGCCAATTTTCTAAAAGTCGAAATTAAACTGGCCTAGCTGCTGGTAAAGATAGTCGGATCTAGACCTCCTATTTGTAGTTTCCACTATTTTTGAACCACGGGTATGTTAAGAATCTTTGGTAGATTATCTCGGGAAATTACGTTTGTCTCGTTCTAGCTAAGACCTGTGGAGCACTTACTAAAGCGCCGGGCACCAACGTGTCGCCAGCCTCGTGTTTGATTGACCGAGCCAATACTGTTGGTGACATCTGTACATTCAGTTGCCAAGCAGGATATGAATTACCCAGCGACACGAACACTTTAGTTTGCGAAAGCTCGTCGCTTTGGAATGGTTCAATAATCAGGTGCCAAAAATTGAGATGCCCAAGCCTTGCAGTCCCCGCAAATGGTTATCTCAGTCCATCAACATGCGGGACAGTTGGAGACCTCTATGAGCATACATGCAATTATTTATGTAGCAGTGGCTATCAAATATCAGGAGTAAGTAGAAAGACATGTCAAAGTAATGGACAGTGGGATAGTCAGGAAGAGCCAACGTGCGGAAAAGTGTTTCCACCTCCAACCATCCAGTGCCCACCCCATGTACGAGTAAACCTTAGTACAGGCGCTAGCACTTCAGATGTTTCTGCTTTGCTCGGATCTCCTGTAACCAATCAGCCAATGGGAGCAATAACAATAAAGCCGCTTAAATATAACACGAGTAAAGTATTTCCAGCAGGAAGAACAATTTTGACTTATACGGTAGCAAATCCTTCCGGCCAAACTGCTAATTGCACCACACTTGTCTCAGTAAGAGACTTAGAGGCACCCCTAGTATCATATTGTCCTTCCAACATCTATAGTCTGATTCCAAATAAAGAGGCTTCCACGGTGGTTAACTGGACCGCACCTACCTTTACAGATAACGTTAGGGTCGTAAATGTTGAGGTATTTCCCCCCTATAGCCCTGGTGACACATTTCAACCAGGTTCAGTTTCCATGACATATACTGCAAAGGATGCTGAAAACAACAAGAAGGAATGCAAATTCAGTATTATCGTTAGACGACAGGAATGTCGCCAACCATCGGATCCTGACAACGGCTCTCTGGATTGTAGAAATTTTGGCAATGGAAAGTTTTGTTCCATAAACTGCAACAAATCAAAGAAAACGTTTAAATTTGTGTTCGGCTTCTTTGTATCGTGCGAGGGAAATGAAGTGCCGGACTGTGTTGATTATACAAGCCTGTCTGCCGGCGGCTCTTGTAGCACTGGTTATGTTCCTCAGAGTGGAGGCTTCGTAGAAGATACTTGCGTGAAGTGTCCGAGAGGAATGTATTTCAATATATCATCAAGCACATGTGAAAAATGCCCCGTTGGATTTATAAGCACTGCAGAAGGATCTTTTAAGTGCGAGGCATGTCCCTCAATGAAATCAACCGAAGGAGAAGGATCCAAGATATGCATTGAACAGTGTGGAGTCGGGAAATTCTCGCAAACTGGACTTGATCTCCTTGGAAGCCTTTCTCCTTGTATACCTTGTCCGTCAGATACTTACCAAGACATGGTTGGTCAAAAATCTTGTAAGCAATGCCCTAATGGAACCCGAACCCACAGTATCGAATCGAAATCTCCCGATGATTGTGGATATGCACCAGTGATCACGCAGTTTGGACCTAGTCCCATCAACGCTGCTCAAAGTGAAAAGGTTCAGTTTGAATGCTATGGAAACGGAAAACCTTTACCAACTTTTTACATCGAAAAAGTTGAAGGGATCGGAAGTCTAGCTACTCGGCAGTACATCTACGATGAGGACAATAATCTGATTGGTTTGCGTTACATCATCACTGCCGCCACAGGAGATGACACGGGCGCTTACCAGTGCAGACTGGTCAATCCATTTGGTGAGGATACTCAGTACCTAACGGTCACGGTCCAAGTGGATTACATTACCGGTAAGCGCCGTCGTCGTCGTCGTTATCTTCGACAGTTGCTTCGAATCTAA

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000992 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07679 all species →	I-set	Immunoglobulin I-set domain	Domain	Interproscan
PF02494 all species →	HYR	HYR domain	Domain	Interproscan
PF07699 all species →	Ephrin_rec_like	Tyrosine-protein kinase ephrin type A/B receptor-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003599 all species →	Domain	Immunoglobulin subtype	Interproscan
IPR013098 all species →	Domain	Immunoglobulin I-set	Interproscan
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR003410 all species →	Domain	HYR domain	Interproscan
IPR011641 all species →	Domain	Tyrosine-protein kinase ephrin type A/B receptor-like	Interproscan
IPR009030 all species →	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24273 all species →	FI04643P-RELATED	Interproscan

Gene Ontology

No Gene Ontology signature was detected for FUN_007104-T1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_007104-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.