Detailed information of FUN_007237-T1 in Dendrogyra cylindrus

Genomic Location: contig_8:5800634...5808543
NR annotation: KAJ7378684.1, hypothetical protein OS493_021988 [Desmophyllum pertusum]
Species Dendrogyra cylindrus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8VI56Low-density lipoprotein receptor-related protein 4 OS=Mus musculus OX=10090 GN=Lrp4 PE=1 SV=3
Q924X6Low-density lipoprotein receptor-related protein 8 OS=Mus musculus OX=10090 GN=Lrp8 PE=1 SV=2
Q9QYP1Low-density lipoprotein receptor-related protein 4 OS=Rattus norvegicus OX=10116 GN=Lrp4 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001020 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00057
all species →
Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036055
all species →
Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR002172
all species →
RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR050685
all species →
FamilyLow-density lipoprotein receptorInterproscan
IPR023415
all species →
Conserved_siteLow-density lipoprotein (LDL) receptor class A, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24270
all species →
LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0005886
all species →
Cellular Componentplasma membraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_007237-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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