Gene detail

Detailed information of FUN_007308-T1 in Dendrogyra cylindrus

Genomic Location: contig_8:6625869...6640083
NR annotation: RMX54058.1, hypothetical protein pdam_00013149 [Pocillopora damicornis]
Species Dendrogyra cylindrus · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_007308-T1

ATGTCACGATCGCTGACGGAGGAAGACGTGAAGAAGTGGCATAGCATTGCGAAGAAATGGGGAAGAGGAAATATTGCAAAGGAATGCAGAGACACGTTTCAATGCCTTCAAGATTTGTCAAGTTTCCTTATGAACCTCGAGAAAGATCTTGGAGAAGTGGTAGGCAACCTGCAACAAATTTTACAGAAATTTCCAAGCGTTGGAAAGCTTCTTGGCCAGTTGTTTGAGAACACTGTTATTTTAATGTCAGGTGAAGTGTTTCAGAGTGTTGTGAGATGCAGTTTAATGCTCTCAAATTGCTCTGGAGTTCAAGAAAGAAGTGTTAATAGGAAGGCAAAAGTCTGGGCCCAGACACAATTGAGACGAGTGACCACACCCATCCTCAAAAGCAGTAACTTGCACCATATTGGGGAATTTTGGGGGTACACTGCTCAGGAATCCATGGAATTGATGGTGGATAAGCTGGTGTCATCACTGTGCCATGACCTAGAGGTAATAAGGAGCTTTACATGGAGCGCTGAAGAGAGAGATTGTTATCCCCAGAAACTAGTATCAGGAAGCTGCCTCAGGGAACTGTCTGAATTCTGTTTACCTCTTCTAACTATCCCACAAGCCAAACCTCTGGTTCTCATCGTTATTGTTCTTGTAGGACTGTTGTTGTCATACGATGCACGAGTAAGTTTGTGGAAGAGGCACCAACCGAGCTTTGAATCAGAAATTTTAGATTTAATCGAGATGTCAACAATTCAGCGGCCGTACATATCCAGGAAGCAACTAAAGAGTGTCATTTCTTCAAATGAAGTGCCTCGTGCGTGCGTGGAGAATCCAGAATTCTTTGCTGTAGCGTTTGGTCTTCTGAGCTCATTTCTTGCCCAATCTGATGGAAATACGCAGGTCGCAAAGCTCTTGTCAGTCTTTGGCGAAATGTGCGTCGAGGAATGCAAAGAGGGGCGCCAACAGGTTCTCGCCACATTTCCTGAGTTGTTTCCTGACTATTGTAGGTCGCTTGTTCGAAAACTGGTGTTCAATCCGCAAGaTGTAAGTGATGAGGAATCCATTCTTTGCAACTTGCAAAGTATTGCCGTGGAACTGGAGCAGCTAACAAATGAATTATCAAAAAGCATAAGATACTTGACCAAGCACCGCGGTATCGAGCTCAAGATGAACGCAAGTAATTCGTCTTCACCTGATGCGTGGAGTGATCTAACCACTCCAACTATGAAGTGGGTATTTCGTATCCTCTTCTCCACCATCTTACTTCTCGGTATTTTTGGAAATGGCGCGGTATGTTCAGCCATCGTTTTGAAGCAGCGGTTACGAACAACAGCCAACCTCCTGGTCTTAAACCTTGCTGCGGCAGATTTCATTTTCGTAGCGCTCTACGCTCCGACACAGCTCTCCTTTTTCGAGAACAACTACAGCTGGGAGATGGGCGACGCTGTTTGTAAGCTTTCGTATGCAGTCTTGCCAGCTTGCCTTTGCTCCACTGTGGAAACTTTGTTGTGCATTGCGCTGCTGCGCTACAAAGCTGTAGCCAATCCGTTTCACGTGCGTGTCGGTATGACTTATAAGACAACTGCTATCGTGATAGCTGTAATATGGCTGTCTTCTTTACTTACGGGATTACCCGTTCTTCTTGTGGCGAAGACCATCCAGTACCAAGACAAGGTATTCTGTGACGAAGTTTGGCCCGTGGACAAACCGTACGCCCAGGTATACTGGGTTTCAATCTTCCTCATCCAGTACGCTGTTCCACTTGTGGTTATCGTATTTCTATCCATTGCCACAGTTTTGAAGGTGAAGCAAAGCCGTGCACGCGTGTTGCCAAGCTCGTTGACCACTAATAACGACGATAATTCCATTGCTAATGTCATGAACGCCAGCGTAAGACAAAGGCGAAGGCGAGAAAACAACATGTCGAAGATGTTAACAGGTTTGGTTATATTGTATGGCATTTGTATGCTTCCCCAGCACGTCGTGTTTTTCTGGCTTACATATGGCGACCTGAAGAAGCAAGACTACTCTCTGTACATTTTTACCATCGCTAATATCTTTCCTATTGCCAATAGCGCGTTAAACCCTCTTATATACGGCAGTTTGCACAAAGAGTTGAAAGCTGgttcgttggctctCGCCATGCTTTTGATTGACGGCCGAGAAAAACCCaatcgtcagttgggctttgaacttcagagttcacatgtcattgaaaaccgcaataactCCAGTGCTGTGTGTGAAGTATTTACCTCACGTGTAATTCCGTGTTCGCTTAAATTTTCTGCAGTGAACTGTTCGCCGTATGGAAGATACTTTGGTGTTTTCCTTCCTGGGAAAGTGAAGTTCTTAGATTGTCGCTGTCAAGCTGTAGAGAAGAGGTACTGGATGGATGTATTGTTATGCTGTGCTGGTTTCATGTTCCTCCTTTGTCAGACAAATATATTTCCTTAA

Transcript

FUN_007308-T1

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P25931	RYamide receptor OS=Drosophila melanogaster OX=7227 GN=RYa-R PE=2 SV=2
P35373	Type-1 angiotensin II receptor B OS=Xenopus laevis OX=8355 GN=agtr1-b PE=2 SV=1
P32303	Type-1 angiotensin II receptor A OS=Xenopus laevis OX=8355 GN=agtr1-a PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007764 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02106 all species →	Fanconi_C	Fanconi anaemia group C protein	Family	Interproscan
PF00001 all species →	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000276 all species →	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR017452 all species →	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR000686 all species →	Family	Fanconi anaemia group C protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45695 all species →	LEUCOKININ RECEPTOR-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0036297 all species →	Biological Process	interstrand cross-link repair	Interproscan
GO:0043240 all species →	Cellular Component	Fanconi anaemia nuclear complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_007308-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.