Gene detail

Detailed information of FUN_007379-T1 in Siderastrea siderea

Genomic Location: contig_5:12990861...12991589
NR annotation: no NCBI-NR hit recorded
Species abbreviation SSIDE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13538 all species →	UvrD_C_2	UvrD-like helicase C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR027785 all species →	Domain	UvrD-like helicase C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23274 all species →	DNA HELICASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000002 all species →	Biological Process	mitochondrial genome maintenance	Interproscan
GO:0000723 all species →	Biological Process	telomere maintenance	Interproscan
GO:0003697 all species →	Molecular Function	single-stranded DNA binding	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0043596 all species →	Cellular Component	nuclear replication fork	Interproscan
GO:0044806 all species →	Biological Process	G-quadruplex DNA unwinding	Interproscan
GO:0071932 all species →	Biological Process	replication fork reversal	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_007379-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.