Gene detail

Detailed information of FUN_007637-T1 in Colpophyllia natans

Genomic Location: contig_9:8086559...8088008
NR annotation: XP_020621900.1, silk gland factor 3-like [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q17237	Silk gland factor 3 OS=Bombyx mori OX=7091 GN=SGF3 PE=2 SV=1
P56224	POU domain, class 3, transcription factor 3-A OS=Danio rerio OX=7955 GN=pou3f3a PE=2 SV=2
P56222	POU domain, class 3, transcription factor 2 OS=Rattus norvegicus OX=10116 GN=Pou3f2 PE=1 SV=1

Gene family	Subfamily
Transcription Factors Family	Homeobox
Transcription Factors Family	Pou

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan
PF00157	Pou	Pou domain - N-terminal to homeobox domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050255	Family	POU domain transcription factor	Interproscan
IPR010982	Homologous_superfamily	Lambda repressor-like, DNA-binding domain superfamily	Interproscan
IPR001356	Domain	Homeobox domain	Interproscan
IPR000327	Domain	POU-specific domain	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR013847	Domain	POU domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11636	POU DOMAIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09365	POU3F, OTF; POU domain transcription factor, class 3	-	Transcription factors	ko03000	deepkoala