Detailed information of FUN_007651-T1 in Colpophyllia natans

Genomic Location: contig_9:8203580...8211504
NR annotation: KAJ7376381.1, hypothetical protein OS493_034902 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q1EA11CCR4-Not complex 3'-5'-exoribonuclease subunit Ccr4 OS=Coccidioides immitis (strain RS) OX=246410 GN=CCR4 PE=3 SV=2
Q2UUI3CCR4-Not complex 3'-5'-exoribonuclease subunit Ccr4 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=ccr4 PE=3 SV=1
A2Q9L0CCR4-Not complex 3'-5'-exoribonuclease subunit Ccr4 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=ccr4 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050410FamilyCCR4/nocturin mRNA turnover and transcriptionInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12121CARBON CATABOLITE REPRESSOR PROTEIN 4Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0000289Biological Processnuclear-transcribed mRNA poly(A) tail shorteningInterproscan
GO:0004535Molecular Functionpoly(A)-specific ribonuclease activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0030014Cellular ComponentCCR4-NOT complexInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan

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