Gene detail

Detailed information of FUN_007673-T1 in Colpophyllia natans

Genomic Location: contig_9:8482635...8492579
NR annotation: XP_020611215.1, major facilitator superfamily domain-containing protein 4A-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

FUN_007673-T1

ATGGCGATTCTAGGACCCACATTGATCGAGTTAGGTCATTTAGTTCACCATGGCTTGGATATGATGAGCTGGTTGTTCTTCACACAGGCAGCGTACGCTCTGCTTGGAGCGAGCGTAGCTGGGATTGTATTGGACAGATACGACATTAATCGTAACCTGCTGCtgctttgttttctgtttttgaatgCCGTTTTCTTGGCAGTGATTCCCATGTGCCGAACACTGTGGCTTCTAATCTTATCAACAGCAGCTGCGGGATTCTCAGTAGGAATTCTGGACACTGCAACTAACGTACAACTTATTGCAATACACGGCaaaaagGTTTCCCCTTATTTACAGgcTCTTTATTTTTCTTATGGTTTCGGCGCGTTTGTGAGCCCGCTCATAGCAGAGCCATTCCTCAGTGGTACACCCCATCCAGATCTCGGGCTGCCGGCGGCCAGGAGAGGGAATCCACTTCCATACGGGGGGATGGGACATCGCAGTCACCATAAGTTATCTCACAGGCCAACCAATCACTTAAGAGATGCGTATTACCCTGGATCGGAGCAATACAAAAGCGAGGTCCAAGTTGCATACTGGATCATAGCCTTAGCACATATACCAGTTGTGATAGGCCttgcatacattgtcttatcAGACAAGTGGGAGGAGCATAAATTAAAaagagctgctgcggccaaggCAGAAAGTGACTACAGCATATCAGAAGTCCCGGATACAGACATAGAAGgcATTACCAATAAAGTTCACTTGGACAAAGAAACTTTGAAGAAACCCGGTCTATGTGACAACCCAAATAAAACCCAGATTCTCTGTATAACCTTCTGGACCTCATTTCTAGTTTTTCTTTATGATGGAATGCAGGGGTCTTATGGCGGGTACGTCTACACATATGCTGTAAAGAGCTCCCTTCATATGACGTCAGCACAAGGTGCATTTCTTACCTCTGTCTTTTGGGGATCACTAGCGTTAGGTCGTCTCATATCAATACCTATAGCCTTGTGTTTGTCTCCAGCAATTATGTTGCTTGTAGATTTGattgGCTGCTTGGTATCTAGTTTATTAATGTTAGCGTTCAGAGCGAGTGAGACCGCGCTGTGGATGGGAACTAGTACATTTGGTCTTTTTATGAGCAATGTATTTCCCACAAGCGTGGCACTAGCAGAACAGTACTTCAATGTCACAGGTACCGTGACCTGCATGTTCGTTGTTAGCGCCGCTATAGGAGAGATGATAATTCCTCTCATCGTGGGCAAAGTGTTTGACTATGTAGGCGCTATTAGCTTCTTAGCAGAGGGATCCATTTTGTGTTTCGCGGCATTTGGAGCATATTTAGCGGTGTTATTAATAGGAAAGGGGGCTGCATCTCACGACGTCCATAAGAGAGAAGtaattggagaagaagatgaagaaagaaagaaagataaTATGCATGGTAACTCAGAACAAGATTCAGATCAACTGGTTTCTAAAGATCATGCTTTAGAAGATAAAACGCCGAACAGATAACGAACGTATAAAGGAAATTATGTTGCATTATATAAAATTGAGTAGACAAAAAACGTGTAGAAAAATGTCGGTTGTAGAACACGACTACGTCACTGGATGATTACGTCATCATAAACGACGTGTTGAGAGGTCTATTTATTTGTAGTGACCTTTACAAGGAGTTGACGCCATTAATTGAGCGACAGAAATAGATCATTTAACGTATGAGCATCACTGAAAAGGAAGTTTGTGAGAAACTCTAAACTGGTGGTCTCTCTGAACTCGATTTATTGATATTTGACAATCCTGCTCGTTTAAAAGAAACACCATCGCATTATTGCACGGTAGATAGCCAATGGAAATTGTTTGTAGCTTTACACCGGGCCATTTAAGGTTTTGACCATTTTTTGTTATAACTGTGATCAGCATAAGTTACGTCACCGTCAATGCTGTCCAACCTTGTTTCCAGGGTTTCTCGCCCCTAGAGGGAGAGAGGAAGGAAAGAggagggcgggaagatgagaaaCCCCGGGAACAAGGCTGAATGCTGTCCTGACACAAGAGAGGTAATGACCTCTACAGTTAAATTAAACGCCTAGATCACGAGTACGATGAACTCCTAGTCAATCACGACAAGAATCAACGCCATTcgcagggtctctcatcttcccatTCTCCTCTCTCGctctaggggggggggggggggggagattaaagaccctggaaacgaggttggaAAACAGTACGGCATTTTCGAACTATCTCTGTTTCAAACAAGTCTCAGTGCAAAAGATttcatattgaaataaaatgagaGTAAaattcatatgaaaggttttgcgaCAGTGCTCTTTTATAAGGCAAATATTAGTTTACAACTATGAGAATAAAATCTCTCCTCTCTATTGCCGTATTATTGCGTAAAGTAAGCCACGCTCTAGAAACAGCCCATATTGAGGAGaatgttaaatattttatacAGAGTGTCAATAGTTTTGTACTCACTATATGAAATAAACCAAACTATTACTTGAAGGCGCTTTAAGACTCGCCAGAAGTTGCGATGTTTCTACGCCACAATTTCATAAATCTGGATTTATCATTTACTGAGGAACCTTTT

Protein

Uniprot

Uniprot term	Description
Q6PDC8	Major facilitator superfamily domain-containing protein 4A OS=Mus musculus OX=10090 GN=Mfsd4a PE=2 SV=2
Q8N468	Major facilitator superfamily domain-containing protein 4A OS=Homo sapiens OX=9606 GN=MFSD4A PE=1 SV=3
Q5BIZ0	Major facilitator superfamily domain-containing protein 4A OS=Xenopus tropicalis OX=8364 GN=mfsd4a PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07690	MFS_1	Major Facilitator Superfamily	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR011701	Family	Major facilitator superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23121	SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005355	Molecular Function	obsolete glucose transmembrane transporter activity	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan