Detailed information of FUN_007989-T1 in Acropora pulchra

Genomic Location: ptg000002l:6872920...6883346
NR annotation: XP_029191237.1, NPC intracellular cholesterol transporter 2-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P61916NPC intracellular cholesterol transporter 2 OS=Homo sapiens OX=9606 GN=NPC2 PE=1 SV=1
P61918NPC intracellular cholesterol transporter 2 OS=Macaca fascicularis OX=9541 GN=NPC2 PE=2 SV=1
P61917NPC intracellular cholesterol transporter 2 OS=Pan troglodytes OX=9598 GN=NPC2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000868 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02221
all species →		E1_DerP2_DerF2ML domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003172
all species →		DomainMD-2-related lipid-recognition domainInterproscan
IPR014756
all species →		Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR033916
all species →		DomainNpc2 like, ML domainInterproscan
IPR039670
all species →		FamilySterol transport protein NPC2-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11306
all species →		NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0032367
all species →		Biological Processintracellular cholesterol transportInterproscan
GO:0015918
all species →		Biological Processsterol transportInterproscan
GO:0032934
all species →		Molecular Functionsterol bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_007989-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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