Genomic Location: contig_9:7361131...7372739
NR annotation: XP_020624048.1, protein gar2-like isoform X2 [Orbicella faveolata]
| CDS | |||||
| FUN_008040-T1 | |||||
| Transcript |
| FUN_008040-T1 |
| Protein |
| FUN_008040-T1 |
| Uniprot term | Description |
|---|---|
| P20397 | Nucleolin OS=Xenopus laevis OX=8355 GN=ncl PE=2 SV=3 |
| P28644 | 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=1 |
| P19338 | Nucleolin OS=Homo sapiens OX=9606 GN=NCL PE=1 SV=3 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00076 | RRM_1 | RNA recognition motif | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR000504 | Domain | RNA recognition motif domain | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR051106 | Family | RNA-binding and splicing regulatory protein | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR48028 | GLYCINE-RICH RNA-BINDING PROTEIN RZ1A | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K11294 | NCL, NSR1; nucleolin | - | Chromosome and associated proteins | ko03036 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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