Detailed information of FUN_008117-T1 in Acropora pulchra

Genomic Location: ptg000002l:8217391...8220942
NR annotation: XP_029211693.2, LOW QUALITY PROTEIN: protein AAR2 homolog [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q08DJ7Protein AAR2 homolog OS=Bos taurus OX=9913 GN=AAR2 PE=2 SV=1
Q5R5N9Protein AAR2 homolog OS=Pongo abelii OX=9601 GN=AAR2 PE=2 SV=1
Q9Y312Protein AAR2 homolog OS=Homo sapiens OX=9606 GN=AAR2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006524 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20981
all species →		AAR2_1stAAR2 N-terminal domainDomainInterproscan
PF05282
all species →		AAR2AAR2 C-terminal repeat regionRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR033647
all species →		DomainAAR2, N-terminalInterproscan
IPR033648
all species →		DomainAAR2, C-terminal domainInterproscan
IPR007946
all species →		FamilyA1 cistron-splicing factor, AAR2Interproscan
IPR038516
all species →		Homologous_superfamilyAAR2, N-terminal domain superfamilyInterproscan
IPR038514
all species →		Homologous_superfamilyAAR2, C-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12689
all species →		A1 CISTRON SPLICING FACTOR AAR2-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000244
all species →		Biological Processspliceosomal tri-snRNP complex assemblyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_008117-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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