Detailed information of FUN_008223-T2 in Acropora pulchra

Genomic Location: ptg000002l:9386724...9402334
NR annotation: XP_044170531.1, spastin-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9QYY8Spastin OS=Mus musculus OX=10090 GN=Spast PE=1 SV=3
B2RYN7Spastin OS=Rattus norvegicus OX=10116 GN=Spast PE=1 SV=1
Q719N1Spastin OS=Sus scrofa OX=9823 GN=SPAST PE=2 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000761 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00004
all species →
AAAATPase family associated with various cellular activities (AAA)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050304
all species →
FamilyMicrotubule-severing AAA ATPaseInterproscan
IPR007330
all species →
DomainMIT domainInterproscan
IPR003959
all species →
DomainATPase, AAA-type, coreInterproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23074
all species →
AAA DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0015630
all species →
Cellular Componentmicrotubule cytoskeletonInterproscan
GO:0140603
all species →
Molecular Functionobsolete ATP hydrolysis activityInterproscan
GO:0005524
all species →
Molecular FunctionATP bindingInterproscan
GO:0016887
all species →
Molecular FunctionATP hydrolysis activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_008223-T2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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