Detailed information of FUN_008310-T1 in Acropora pulchra

Genomic Location: ptg000002l:10160715...10162093
NR annotation: XP_029197469.2, S1 RNA-binding domain-containing protein 1-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P14128Small ribosomal subunit protein bS1 (Fragment) OS=Providencia sp. OX=589 GN=rpsA PE=3 SV=1
P37985Small ribosomal subunit protein bS1 OS=Dickeya dadantii (strain 3937) OX=198628 GN=rpsA PE=3 SV=2
P0AG69Small ribosomal subunit protein bS1 OS=Escherichia coli O157:H7 OX=83334 GN=rpsA PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003648 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00575
all species →		S1S1 RNA binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050437
all species →		FamilyBacterial ribosomal protein bS1Interproscan
IPR003029
all species →		DomainS1 domainInterproscan
IPR012340
all species →		Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10724
all species →		30S RIBOSOMAL PROTEIN S1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003729
all species →		Molecular FunctionmRNA bindingInterproscan
GO:0003735
all species →		Molecular Functionstructural constituent of ribosomeInterproscan
GO:0006412
all species →		Biological ProcesstranslationInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_008310-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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