Detailed information of FUN_008397-T1 in Acropora pulchra

Genomic Location: ptg000002l:11102048...11123216
NR annotation: XP_044185208.1, neuroblast differentiation-associated protein AHNAK-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q0P5F3Protein lin-7 homolog C OS=Bos taurus OX=9913 GN=LIN7C PE=2 SV=1
Q5F425Protein lin-7 homolog C OS=Gallus gallus OX=9031 GN=LIN7C PE=1 SV=1
Q9NUP9Protein lin-7 homolog C OS=Homo sapiens OX=9606 GN=LIN7C PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010544 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00595
all species →		PDZPDZ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001478
all species →		DomainPDZ domainInterproscan
IPR052082
all species →		FamilyPeripheral myelin sheath structural proteinInterproscan
IPR036034
all species →		Homologous_superfamilyPDZ superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23348
all species →		PERIAXIN/AHNAKInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0043484
all species →		Biological Processregulation of RNA splicingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K23934AHNAK; neuroblast differentiation-associated protein AHNAK-Salmonella infectionko05132deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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