Detailed information of FUN_008484-T3 in Acropora pulchra

Genomic Location: ptg000002l:12082053...12109587
NR annotation: XP_029214094.2, ribosome biogenesis protein NOP53-like isoform X3 [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9NZM5Ribosome biogenesis protein NOP53 OS=Homo sapiens OX=9606 GN=NOP53 PE=1 SV=2
Q8BK35Ribosome biogenesis protein NOP53 OS=Mus musculus OX=10090 GN=Nop53 PE=1 SV=1
Q9W3C2Ribosome biogenesis protein NOP53 OS=Drosophila melanogaster OX=7227 GN=CG1785 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005909 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07767
all species →		Nop53Nop53 (60S ribosomal biogenesis)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011687
all species →		FamilyRibosome biogenesis protein Nop53/GLTSCR2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14211
all species →		GLIOMA SUPPRESSOR CANDIDATE REGION GENE 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000027
all species →		Biological Processribosomal large subunit assemblyInterproscan
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan
GO:0006364
all species →		Biological ProcessrRNA processingInterproscan
GO:0008097
all species →		Molecular Function5S rRNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_008484-T3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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