Detailed information of FUN_008511-T1 in Acropora pulchra

Genomic Location: ptg000002l:12379995...12381305
NR annotation: XP_029195782.1, sorting nexin-17-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5RID7Sorting nexin-17 OS=Danio rerio OX=7955 GN=snx17 PE=2 SV=1
Q5EA77Sorting nexin-17 OS=Bos taurus OX=9913 GN=SNX17 PE=2 SV=1
Q15036Sorting nexin-17 OS=Homo sapiens OX=9606 GN=SNX17 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004366 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21273
all species →		SNX17-27-31_F1_FERMSortin nexin 17/27/31, FERM domain, F1 lobeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000299
all species →		DomainFERM domainInterproscan
IPR048763
all species →		DomainSortin nexin 17/31, FERM domain, F1 lobeInterproscan

 PANTHER
No PANTHER signature was detected for FUN_008511-T1. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0005856
all species →		Cellular ComponentcytoskeletonInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_008511-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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