Gene detail

Detailed information of FUN_008519-T1 in Acropora pulchra

Genomic Location: ptg000002l:12437484...12439075
NR annotation: XP_015774609.1, PREDICTED: GDP-fucose transporter 1-like [Acropora digitifera]
Species abbreviation APULC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A7S1L6	GDP-fucose transporter 1 OS=Nematostella vectensis OX=45351 GN=slc35c1 PE=3 SV=1
A6QM03	GDP-fucose transporter 1 OS=Bos taurus OX=9913 GN=SLC35C1 PE=2 SV=1
Q96A29	GDP-fucose transporter 1 OS=Homo sapiens OX=9606 GN=SLC35C1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006872 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03151 all species →	TPT	Triose-phosphate Transporter family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004853 all species →	Domain	Sugar phosphate transporter domain	Interproscan
IPR050186 all species →	Family	Triose Phosphate/Phosphate Translocator	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11132 all species →	SOLUTE CARRIER FAMILY 35	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005457 all species →	Molecular Function	GDP-fucose transmembrane transporter activity	Interproscan
GO:0005794 all species →	Cellular Component	Golgi apparatus	Interproscan
GO:0015297 all species →	Molecular Function	antiporter activity	Interproscan
GO:0036066 all species →	Biological Process	protein O-linked fucosylation	Interproscan
GO:0036085 all species →	Biological Process	GDP-fucose import into Golgi lumen	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15279	SLC35C1, FUCT1; solute carrier family 35 (GDP-fucose transporter), member C1	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.