Detailed information of FUN_008525-T1 in Acropora pulchra

Genomic Location: ptg000002l:12484668...12540699
NR annotation: XP_029205655.2, LOW QUALITY PROTEIN: A disintegrin and metalloproteinase with thrombospondin motifs 9-like [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9P2N4A disintegrin and metalloproteinase with thrombospondin motifs 9 OS=Homo sapiens OX=9606 GN=ADAMTS9 PE=1 SV=4
P59511A disintegrin and metalloproteinase with thrombospondin motifs 20 OS=Mus musculus OX=10090 GN=Adamts20 PE=2 SV=2
P59510A disintegrin and metalloproteinase with thrombospondin motifs 20 OS=Homo sapiens OX=9606 GN=ADAMTS20 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000160 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF19030
all species →		TSP1_ADAMTSThrombospondin type 1 domainDomainInterproscan
PF08685
all species →		GONGON domainDomainInterproscan
PF05986
all species →		ADAMTS_spacer1ADAM-TS Spacer 1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036383
all species →		Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000884
all species →		RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR012314
all species →		DomainPeptidase M12B, GON-ADAMTSsInterproscan
IPR050439
all species →		FamilyADAMTS and ADAMTS-likeInterproscan
IPR010294
all species →		DomainADAMTS/ADAMTS-like, Spacer 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13723
all species →		ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004222
all species →		Molecular Functionmetalloendopeptidase activityInterproscan
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan
GO:0006508
all species →		Biological ProcessproteolysisInterproscan
GO:0030198
all species →		Biological Processextracellular matrix organizationInterproscan
GO:0031012
all species →		Cellular Componentextracellular matrixInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K08624ADAMTS9; a disintegrin and metalloproteinase with thrombospondin motifs 9EC:3.4.24.-
Peptidases and inhibitorsko01002deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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