Detailed information of FUN_008588-T1 in Dendrogyra cylindrus

Genomic Location: contig_11:410253...449238
NR annotation: XP_020630259.1, E3 ubiquitin-protein ligase TRIM71-like [Orbicella faveolata]
Species Dendrogyra cylindrus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000277 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08450
all species →		SGLSMP-30/Gluconolactonase/LRE-like regionRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011042
all species →		Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR017868
all species →		RepeatFilamin/ABP280 repeat-likeInterproscan
IPR013658
all species →		DomainSMP-30/Gluconolactonase/LRE-like regionInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR001258
all species →		RepeatNHL repeatInterproscan
IPR014756
all species →		Homologous_superfamilyImmunoglobulin E-setInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10680
all species →		PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005576
all species →		Cellular Componentextracellular regionInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_008588-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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