Detailed information of FUN_008709-T1 in Acropora pulchra

Genomic Location: ptg000002l:14624764...14634219
NR annotation: XP_029185468.2, mRNA-decapping enzyme 1B-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3U564mRNA-decapping enzyme 1B OS=Mus musculus OX=10090 GN=Dcp1b PE=1 SV=1
Q8IZD4mRNA-decapping enzyme 1B OS=Homo sapiens OX=9606 GN=DCP1B PE=1 SV=2
Q5R413mRNA-decapping enzyme 1B OS=Pongo abelii OX=9601 GN=DCP1B PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006381 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16741
all species →		mRNA_decap_CmRNA-decapping enzyme C-terminusDomainInterproscan
PF06058
all species →		DCP1Dcp1-like decapping familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010334
all species →		FamilymRNA-decapping enzyme subunit 1Interproscan
IPR031953
all species →		DomainmRNA-decapping enzyme, C-terminalInterproscan
IPR011993
all species →		Homologous_superfamilyPH-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16290
all species →		TRANSCRIPTION FACTOR SMIF DECAPPING ENZYME DCP1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000290
all species →		Biological Processdeadenylation-dependent decapping of nuclear-transcribed mRNAInterproscan
GO:0000932
all species →		Cellular ComponentP-bodyInterproscan
GO:0003729
all species →		Molecular FunctionmRNA bindingInterproscan
GO:0008047
all species →		Molecular Functionenzyme activator activityInterproscan
GO:0031087
all species →		Biological Processdeadenylation-independent decapping of nuclear-transcribed mRNAInterproscan
GO:0043085
all species →		Biological Processpositive regulation of catalytic activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_008709-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP