Detailed information of FUN_008892-T1 in Acropora pulchra

Genomic Location: ptg000004l:329500...335214
NR annotation: XP_029195668.2, rRNA-processing protein EFG1-like isoform X5 [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008122 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10153
all species →		Efg1rRNA-processing protein Efg1FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050786
all species →		FamilyEFG1 rRNA-processingInterproscan
IPR019310
all species →		FamilyrRNA-processing protein Efg1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33911
all species →		RRNA-PROCESSING PROTEIN EFG1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000462
all species →		Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan
GO:0030688
all species →		Cellular Componentpreribosome, small subunit precursorInterproscan
GO:0006364
all species →		Biological ProcessrRNA processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_008892-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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