Detailed information of FUN_009042-T1 in Acropora pulchra

Genomic Location: ptg000004l:1897699...1902225
NR annotation: XP_015757793.1, PREDICTED: tyrosyl-DNA phosphodiesterase 2-like [Acropora digitifera]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O95551Tyrosyl-DNA phosphodiesterase 2 OS=Homo sapiens OX=9606 GN=TDP2 PE=1 SV=1
A7YWI9Tyrosyl-DNA phosphodiesterase 2 OS=Bos taurus OX=9913 GN=TDP2 PE=2 SV=1
Q9JJX7Tyrosyl-DNA phosphodiesterase 2 OS=Mus musculus OX=10090 GN=Tdp2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005343 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14555
all species →		UBA_4UBA-like domainDomainInterproscan
PF03372
all species →		Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009060
all species →		Homologous_superfamilyUBA-like superfamilyInterproscan
IPR036691
all species →		Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135
all species →		DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR051547
all species →		FamilyTyrosyl-DNA phosphodiesterase 2-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15822
all species →		TRAF AND TNF RECEPTOR-ASSOCIATED PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan
GO:0003697
all species →		Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0006302
all species →		Biological Processdouble-strand break repairInterproscan
GO:0016605
all species →		Cellular ComponentPML bodyInterproscan
GO:0070260
all species →		Molecular Function5'-tyrosyl-DNA phosphodiesterase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_009042-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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