Detailed information of FUN_009169-T1 in Acropora pulchra

Genomic Location: ptg000004l:3479223...3490224
NR annotation: XP_044166740.1, tetratricopeptide repeat protein 28-like, partial [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q96AY4Tetratricopeptide repeat protein 28 OS=Homo sapiens OX=9606 GN=TTC28 PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000014 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13176
all species →		TPR_7Tetratricopeptide repeatRepeatInterproscan
PF13424
all species →		TPR_12Tetratricopeptide repeatRepeatInterproscan
PF00515
all species →		TPR_1Tetratricopeptide repeatRepeatInterproscan
PF12770
all species →		CHATCHAT domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR019734
all species →		RepeatTetratricopeptide repeatInterproscan
IPR051476
all species →		FamilyBacterial Response Regulator Aspartate PhosphataseInterproscan
IPR024983
all species →		DomainCHAT domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46630
all species →		TETRATRICOPEPTIDE REPEAT PROTEIN 29Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0003341
all species →		Biological Processcilium movementInterproscan
GO:0005929
all species →		Cellular ComponentciliumInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_009169-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP