Gene detail

Detailed information of FUN_009327-T2 in Dendrogyra cylindrus

Genomic Location: contig_12:4242695...4262152
NR annotation: XP_020627524.1, lipopolysaccharide-binding protein-like isoform X1 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P17213	Bactericidal permeability-increasing protein OS=Homo sapiens OX=9606 GN=BPI PE=1 SV=4
P18428	Lipopolysaccharide-binding protein OS=Homo sapiens OX=9606 GN=LBP PE=1 SV=3
P17453	Bactericidal permeability-increasing protein OS=Bos taurus OX=9913 GN=BPI PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01273	LBP_BPI_CETP	LBP / BPI / CETP family, N-terminal domain	Family	Interproscan
PF02886	LBP_BPI_CETP_C	LBP / BPI / CETP family, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017942	Domain	Lipid-binding serum glycoprotein, N-terminal	Interproscan
IPR017943	Homologous_superfamily	Bactericidal permeability-increasing protein, alpha/beta domain superfamily	Interproscan
IPR032942	Family	BPI/LBP/Plunc family	Interproscan
IPR001124	Domain	Lipid-binding serum glycoprotein, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10504	BACTERICIDAL PERMEABILITY-INCREASING BPI PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008289	Molecular Function	lipid binding	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan