Detailed information of FUN_009343-T1 in Acropora pulchra

Genomic Location: ptg000004l:5529045...5535244
NR annotation: XP_029182785.2, cuticle collagen 8-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010831 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01391
all species →		CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050938
all species →		FamilyCollagen and Collagen-like Structural ProteinsInterproscan
IPR008160
all species →		RepeatCollagen triple helix repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37456
all species →		SI:CH211-266K2.1Interproscan

 Gene Ontology
No Gene Ontology signature was detected for FUN_009343-T1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_009343-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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