Detailed information of FUN_009497-T1 in Acropora pulchra

Genomic Location: ptg000004l:7699817...7708010
NR annotation: XP_044165430.1, neurogenic locus notch homolog protein 1-like [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8VHS2Protein crumbs homolog 1 OS=Mus musculus OX=10090 GN=Crb1 PE=1 SV=3
P82279Protein crumbs homolog 1 OS=Homo sapiens OX=9606 GN=CRB1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000007 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12947
all species →		EGF_3EGF domainDomainInterproscan
PF00024
all species →		PAN_1PAN domainDomainInterproscan
PF00008
all species →		EGFEGF-like domainDomainInterproscan
PF00059
all species →		Lectin_CLectin C-type domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR024731
all species →		DomainEGF domainInterproscan
IPR016186
all species →		Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR018097
all species →		Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR001881
all species →		DomainEGF-like calcium-binding domainInterproscan
IPR003609
all species →		DomainPAN/Apple domainInterproscan
IPR051830
all species →		FamilyNeurogenic locus notch homologInterproscan
IPR000152
all species →		PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR016187
all species →		Homologous_superfamilyC-type lectin foldInterproscan
IPR001304
all species →		DomainC-type lectin-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24033
all species →		EGF-LIKE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_009497-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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