Detailed information of FUN_009522-T1 in Acropora pulchra

Genomic Location: ptg000004l:7985823...7993586
NR annotation: XP_015774704.1, PREDICTED: uncharacterized protein LOC107352896, partial [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q27403Transcription factor glial cells missing OS=Drosophila melanogaster OX=7227 GN=gcm PE=1 SV=2
Q9VLA2Transcription factor glial cells missing 2 OS=Drosophila melanogaster OX=7227 GN=gcm2 PE=2 SV=4
P70348Chorion-specific transcription factor GCMa OS=Mus musculus OX=10090 GN=Gcm1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009071 (this species only)
Transcription factor familyGCM · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03615
all species →		GCMGCM motif proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003902
all species →		DomainTranscription regulator GCM domainInterproscan
IPR039791
all species →		FamilyChorion-specific transcription factor GCMInterproscan
IPR043021
all species →		Homologous_superfamilyGCM, small domainInterproscan
IPR043020
all species →		Homologous_superfamilyGCM domain, large subdomainInterproscan
IPR036115
all species →		Homologous_superfamilyGCM domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12414
all species →		GLIAL CELLS MISSING RELATED/GLIDEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978
all species →		Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0001228
all species →		Molecular FunctionDNA-binding transcription activator activity, RNA polymerase II-specificInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0042063
all species →		Biological ProcessgliogenesisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_009522-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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