Gene detail

Detailed information of FUN_009559-T1 in Colpophyllia natans

Genomic Location: contig_12:4595020...4605002
NR annotation: KAJ7373209.1, hypothetical protein OS493_014357 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

FUN_009559-T1

AAACAAGTCACTCTTTGTTAAGCAGGACCTGCGTGACATCTATGACATCCGTGACTTCGAGTCACACTAGATTGATAACTTACGGTAATTTACAATTCTCTAGGATTTCGGAGGTCGTTCTGTTTCGAAGGCGAAAACAGCGAAAAGTCTGAAAGATGATCAAAACCTGGCGTCAACTTGGTCCTTTTCTAGTACATCGGAGTTCTGCCATCTACAACGCTAGAAATGTTCTTCCAGCTGCTCGCTTTGTGTTGGGAAGCAGGCCGAACTCAAATCAGAGGGCCTTGTTTTCGACGGATACAAAGaaagGTTCTGTTCTAGACCGTCTAAAAGCGGGCGACATCCTAGTTGGTGATGGAGGCATGACCTTCTGTTTGGAGAAGCGTGGATATGTAAAAGCAGGACCTTGGTCGCCGGAGTGCACCGTGGAGAGCCCAGAGGCAGTCCGCCAGGTTCATCGCGAGTTTCTTCGAGCAGGTGCAGATGTTATCCAGGCTTTTACATTTTCCATGGACGATGAAATCATTGACGAGAAGAACGATGAAATAAATCAGTCCGCTTGCGACCTGGCCAAGGGCGTGGCTCAAGAGGGTGGGGTGTTCTGTGCGGGCTCCATCTGCCAAACGGCAAGACTTTACACGCAGGGAGTTGGAAAGGAGCGTATACAGAAACGGTTTGAGGAACAGATTGCAATATTCCTTAAGAATGACTTGGACTTACTGATTGCTGAGTTCTTTGAGTACGGAGAAGAAGCTGAATGGGTAGTTGAAGTGATGAAGAACACAGGCAAACCAACAGCCATCACTATGAGTATTGGTCCTGTTGGAGATAGTAACAACGTGTCGACAGGAGAGTGTGCGGTTAAACTGGCAAGGGCGGGCGCTGACATTATTGGAGTGAACTGCAAGTTCGATCCCAACACTTCCATCGAAACTCTTCGTCTGATGAAAGAAGCGCTGGACAAAGAGGGGCTCAATCCTTACCTGATGATTCAACCCGTTGGTTACCATACCCCGGACGCCGGCCGGGTTGGGTTCGCTAGCTTACCTGAGACGCCTTTCGCTTTGGAGCCCCGTACACTAACTCGCTGGGACGTGCATAAGTACGCTAGGCAGGCCTATGATATGGGAGTGAGGTATATCGGAGGCTGCTGTGGCTTTGAACCATACCACATCCGGGCCATTGCGGAAGAGCTTGCCCCAGAACGTGGTTTTCTTCCTGTAGCAAGTGAAAAACATGAACTTTGGGGAGGAGCATTGACAAATCACCCAAAAGAATGGATGAAACGCAAGGCCAATCGAGATTTCTGGGAGAACCTGGAACCTGCTACTGGTCGTCCCTATTCGGCCGCGAAATCCAAGTTTGACGGACCTGCTTGATGACATCACAGTTAGCTACGAAACATGCATTATAAAATTTAGTCAATGATACCTTCAAGGGGGGTGTGTTGTATTACACCAATCATGGCAATGTATACAGGTTTTCTTATAATACTTATTCCTGGTATTTTGTGTCCATGATACCTCGAATCAcgattgtatttttatttaaccGGAGAGCGATGGTTTCTTTTACATGCGCTTTCGTATTTGCCGTCTTTATCTCGTCTTTACGAATTGAAATTCGGTCTTAAAATTCAACAgacttttattttaatatttcgacTGTTTAAGTCATTTGTGTGTAGTGTCCTCCGTTTGTGTGTTTTGTGAATATTAACAAGAAAACCAGCCCGCGAGGCCAATAGATCAGGTGCAAGAGAATTCATATCACATTCAGATCATATTCTCGTGTCAGGTGTCATTCACCATGTGATCCATCATCTAGGATATTTTTCCACTCATTTACGTGCTCGAGGCTGCGCACCATGCTCGTGTATGGCGTTTCGCGTAGTGCCCCGCTAATCTGCCTGTTTCGCAGGCTAGCCAACAGCAAGTAAAGCCACATGATTCATCAGGTGATCAACAAGGTAAATCGAATGTGTTTCCTGTGTTTTGCTTGCCTTGTTCCTGTTTGGCCTTTATGGTAAATTGATGTTCGTGACGTAATACTTCAGACCACGTGACCCGAAATGA

Protein

Uniprot

Uniprot term	Description
Q91WS4	S-methylmethionine--homocysteine S-methyltransferase BHMT2 OS=Mus musculus OX=10090 GN=Bhmt2 PE=1 SV=2
Q5I597	Betaine--homocysteine S-methyltransferase 1 OS=Bos taurus OX=9913 GN=BHMT PE=2 SV=1
Q5XGM3	Betaine--homocysteine S-methyltransferase 1 OS=Xenopus laevis OX=8355 GN=bhmt PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02574	S-methyl_trans	Homocysteine S-methyltransferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051524	Family	Betaine-homocysteine S-methyltransferase	Interproscan
IPR003726	Domain	Homocysteine-binding domain	Interproscan
IPR036589	Homologous_superfamily	Homocysteine-binding domain superfamily	Interproscan
IPR017226	Family	Betaine-homocysteine S-methyltransferase, BHMT	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46120	BETAINE--HOMOCYSTEINE S-METHYLTRANSFERASE 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0009086	Biological Process	methionine biosynthetic process	Interproscan
GO:0047150	Molecular Function	betaine-homocysteine S-methyltransferase activity	Interproscan
GO:0008168	Molecular Function	methyltransferase activity	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00544	BHMT; betaine-homocysteine S-methyltransferase	EC:2.1.1.5	Cysteine and methionine metabolism	ko00270	deepkoala