Gene detail

Detailed information of FUN_009560-T1 in Colpophyllia natans

Genomic Location: contig_12:4602276...4602823
NR annotation: XP_020626168.1, late histone H2B.L4-like [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q27484	Probable histone H2B 3 OS=Caenorhabditis elegans OX=6239 GN=his-41 PE=3 SV=3
Q27876	Probable histone H2B 4 OS=Caenorhabditis elegans OX=6239 GN=his-48 PE=3 SV=3
Q64475	Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00125	Histone	Core histone H2A/H2B/H3/H4	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009072	Homologous_superfamily	Histone-fold	Interproscan
IPR000558	Family	Histone H2B	Interproscan
IPR007125	Domain	Histone H2A/H2B/H3	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23428	HISTONE H2B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0046982	Molecular Function	protein heterodimerization activity	Interproscan
GO:0000786	Cellular Component	nucleosome	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0030527	Molecular Function	structural constituent of chromatin	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11252	H2B; histone H2B	-	Exosome	ko04147	deepkoala