Gene detail

Detailed information of FUN_009587-T3 in Siderastrea siderea

Genomic Location: contig_7:9629667...9634013
NR annotation: no NCBI-NR hit recorded
Species Siderastrea siderea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04194 all species →	PDCD2_C	Programmed cell death protein 2, C-terminal putative domain	Domain	Interproscan
PF01753 all species →	zf-MYND	MYND finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007320 all species →	Domain	Programmed cell death protein 2, C-terminal	Interproscan
IPR002893 all species →	Domain	Zinc finger, MYND-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12298 all species →	PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14801	TSR4; pre-rRNA-processing protein TSR4	-	Ribosome biogenesis	ko03009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.