Detailed information of FUN_009821-T1 in Acropora pulchra

Genomic Location: ptg000004l:12118683...12124412
NR annotation: XP_015755047.1, PREDICTED: high mobility group protein B1-like [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q03973High mobility group protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=HMO1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009120 (this species only)
Transcription factor familyHMG · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505
all species →		HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009071
all species →		DomainHigh mobility group box domainInterproscan
IPR036910
all species →		Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR051762
all species →		FamilyUpstream Binding Factor 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46318
all species →		UPSTREAM BINDING TRANSCRIPTION FACTORInterproscan

 Gene Ontology
No Gene Ontology signature was detected for FUN_009821-T1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_009821-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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