Detailed information of FUN_010020-T1 in Acropora pulchra

Genomic Location: ptg000004l:13623457...13625555
NR annotation: XP_015770611.1, PREDICTED: zinc finger protein 503-like [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q05AQ8Zinc finger protein 503 OS=Xenopus tropicalis OX=8364 GN=znf503 PE=2 SV=1
Q7ZWN6Zinc finger protein 703-A OS=Xenopus laevis OX=8355 GN=znf703-a PE=2 SV=2
Q566L4Zinc finger protein 703 OS=Xenopus tropicalis OX=8364 GN=znf703 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009152 (this species only) · gene tree & orthology
Transcription factor familyzf-C2H2 · all TF in this species

 Pfam domain
No Pfam domain signature was recorded for FUN_010020-T1 in Acropora pulchra.
 InterPro
InterPro termTypeDescriptionSource
IPR013087
all species →		DomainZinc finger C2H2-typeInterproscan
IPR036236
all species →		Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR051520
all species →		FamilyElbow/Noc Zinc FingerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12522
all species →		ZINC-FINGER PROTEIN NOLZ1-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0045892
all species →		Biological Processnegative regulation of DNA-templated transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_010020-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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