Gene detail

Detailed information of FUN_010164-T1 in Dendrogyra cylindrus

Genomic Location: contig_14:1884368...1902057
NR annotation: CAH3121971.1, unnamed protein product, partial [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

FUN_010164-T1

ATGCGATATCTATTGCTCAACGAGAATCGTCTCCAGGTGATCCCTGATCAGGCATTCAAGAACCTAAAAAGTCTGAGAATAATAGTGCTTTCAGATAATTCCATCAAGACTATTGGATTACAAGCGTTCACCGTTTCAAGTGAAAAGCTTTTAATATATATGATACGGACTGAGATAAAAACAGTGAGCCTTCGGTCTTTCAATGGCATTAATAATCTAACTGCTGATATAAGCATGGACGAAGGAAAAATTGGTACCTTAAAATTTATGGAGGCAGATCAAACAGAACGTTGCAGAGTTCACCTTGGTCTAGGGCAAGATAACAGTGACTACATCGATGTCTCAGGAATTGGAATAATGCTAATAAACCTTCTTCTCAAGGCTTTTGGGCAAGCTGGATTTGCGAAAAAAGGGCAAGATAAATACAAGCTACTTCCATGTCCCACTGGAACATATCTTAATTCATCTGTCACCGATACTGGAAAACTTGAGTGCTTGGAATGCCCTGCAGGTGCCTTTTACTCTGACACTAAAGCTTTTGTCCACGACAGTTGCCTGAAGTGCCCCAATGGCACTTTCGTCCCCTACAATAAAGCACCTGGAGTCAGGGCACGAGATTGCATTGCATGTCCACAAGGAACTGACACCAACGCGTTCGCTGGGTATCGCGCTTGTAAATGCTTGAAAGGATTCTACCGAACTCATCGGTTTGAAGGGTGCAAACCATGTGATCAAGATGGATTAAAATGTGAAAACGACTACGCTACGCTCAAGACTGGCTATTGGTGGAAATGGAGAAACCAAACATACAAAATACTTTATGAAAATTTTACCATGAACCTCATTAATATCACTTATAGCCCAGTTCAAAGCATCAACTCTGCGATAATTTCTCGCTCCCACAAAGAGTTCCCACACACTTTGCCCAATCCACATAAATGCCCAAGGGAAGAGTCATGCATGGGTGGTCTAGAATCGCCATGTGATGCTGGCTATCAAGGCCCATTGTGTGAAGTATGCAGCCCTGGATACCACAAACAATTGCAGTCGTGCAAACAATGTCCCACAAAGAAATGGATGATTGTCCAGCTGTCAATCTTGGCGACAGTAGTTACGATAGTCATCGCAGTTGTGGTGTGGACAGGCaaaaagaaaagcaagaaaACAGAAGGACGCTCTGCCGTGGATATAATCCTTGGAAGGCTCAAAATTATTATTGGTTTCTATCAAGTAACATATGGAGTTCTAGAAGCATTCTCGTACATTAAATGGCCAGACTCTCTTGCGCTTATTGGAAAATATTCCGAGCTTTTGCAGCTGAGTGTTTTTCAGATAGCACCAATTCACTGCCTCTTCCCAAATTTAAAAATCAACGCTTTTGGAAGTTTGTTTGCCATAATCGCCATGAATGCTACTGCCATTTTTCTGTCTGTCCTTGCTTACGGACTTAGAAAGCTATTTCTACTGCAGAGCACATTAAACAGAGAACAGAAGGAGAAGAaagctgccaaaaccaaagagCTCATCTACCGAAacttgtttttcttcctgtacgTGACTTTCCTCAGTACGTGCTCAAAGACAGCAAACGTGCTTCCCCTTGCTTGTCGCACCCTTTGCCTCGACGAAAAGGACGAAATGTGTGACGTATTCCTAAAAGCAGACTACAACATAAGATGCGAAGGTCCAAAGTACAATCGTTTGGTTATCGTTGCATACTGCGCTGTTTTTTACATACTGTTTCTTCCAACCGCATCTCTGATAGCTCTTTGGAGACAACGTAGGGCACTCCGCATAAATGAAAGCCAAACCGAGAATAGAGGATTGGAGGCTCAAGATCAAGGCACAGAAATTATCACAGGGTTAAGATTCCTATTTGAAAACTATAATTCTCATTCATGGTATTGGGAATTAATTGAAACGATTCGCAAGGTTGTTTTGACATCTGGTTTGATACTTGTGGGTGGGGAGAGCAGGGCGTATGTTGGACTAGCTTGTGTCATGTCAGGGCTTTATGGAATGTTCTTCGCCTATATCAGCCCTATAGTGGATCCATTTGAGAATAAATTAATGTTAACATCTCTCGCCGTCACATTCGTTAATTTAGGCATAGGAGCTGTGAGCAAAATCCCAAAAGAGAATATACCAGCCTCCATAGACCCATACGTGGACAGTGTCATGTTCAAGATTCTTGTGTTTGGAGCTAACTCGTTAGTTATTGGTCTTCTCGTAGtgcaATACGTTGTATACATTTATCGTTACATCAAAGAATGGCGCAAAAATCCACAATGGTCCTTTTCTTGTTGCCTGGCCATGGTCCTGCCTCTTACAGACTTGCAGAGTGAAATACGTGGACTGACTGGCAGGAACGTTCTTAAGCAACAACTTCAAACTGGTAAAATCAACATGCCGTCGATGTCTGACAGTTTTAAAGACAGCGGGGCAGTTACCTTTGGTCTTGAAGAAGACGAAACGAGCCTAAAGAAGATAACAAGGAAGCGTGGAAAAATTACTAACGGCAACAGCGAGGAAAATAACAAACTTATTTGTAGCGTGAGCTCGACTGATGATGGAAAAAGTCTTATTCATGAGCTTCCAATAGAGATGGACGACACTTCCCTTTAA

Transcript

FUN_010164-T1

TAGGCCTTGTCAATATGTTTCCTTTTGACATTATTTAGAAGCCATTCGATGCTAAGTATGTTATTTTTTGTATCTCTCGCAGAGGCTTGGGAGGAAATAATATTGAGAATTTGACGAAAAATGTGTTCTCTACTTTGGTGAGCTTGCGATACCTGTATCTACATTCAAATAAGATTCAATATCTGCCCACTGGGACATTTGCCAGGCAAAGGCGGTTAACGTTGTTGAATATCTCACGGAATGAAATCCGAAGTCTGTCAGGAGGGATATTCTCAAAGTTTTCGAATTTATATATATTGGACTTGGAAGGGAATGCGATTCAACATTTGCAAACAGGAGTATTCTCCAACCTAAGGACATTGATATACCTAAACTTAGCTGAAAATAAAATCAAGGACATTGCACCTGGCGTTTTTGGATCTACACTTATATTTTTatttctgcaaaaaaacttgataaGCACTATATCAAATAGAACATTTTCTAGCCCAGTGAAGATGCGATATCTATTGCTCAACGAGAATCGTCTCCAGGTGATCCCTGATCAGGCATTCAAGAACCTAAAAAGTCTGAGAATAATAGTGCTTTCAGATAATTCCATCAAGACTATTGGATTACAAGCGTTCACCGTTTCAAGTGAAAAGCTTTTAATATATATGATACGGACTGAGATAAAAACAGTGAGCCTTCGGTCTTTCAATGGCATTAATAATCTAACTGCTGATATAAGCATGGACGAAGGAAAAATTGGTACCTTAAAATTTATGGAGGCAGATCAAACAGAACGTTGCAGAGTTCACCTTGGTCTAGGGCAAGATAACAGTGACTACATCGATGTCTCAGGAATTGGAATAATGCTAATAAACCTTCTTCTCAAGGCTTTTGGGCAAGCTGGATTTGCGAAAAAAGGGCAAGATAAATACAAGCTACTTCCATGTCCCACTGGAACATATCTTAATTCATCTGTCACCGATACTGGAAAACTTGAGTGCTTGGAATGCCCTGCAGGTGCCTTTTACTCTGACACTAAAGCTTTTGTCCACGACAGTTGCCTGAAGTGCCCCAATGGCACTTTCGTCCCCTACAATAAAGCACCTGGAGTCAGGGCACGAGATTGCATTGCATGTCCACAAGGAACTGACACCAACGCGTTCGCTGGGTATCGCGCTTGTAAATGCTTGAAAGGATTCTACCGAACTCATCGGTTTGAAGGGTGCAAACCATGTGATCAAGATGGATTAAAATGTGAAAACGACTACGCTACGCTCAAGACTGGCTATTGGTGGAAATGGAGAAACCAAACATACAAAATACTTTATGAAAATTTTACCATGAACCTCATTAATATCACTTATAGCCCAGTTCAAAGCATCAACTCTGCGATAATTTCTCGCTCCCACAAAGAGTTCCCACACACTTTGCCCAATCCACATAAATGCCCAAGGGAAGAGTCATGCATGGGTGGTCTAGAATCGCCATGTGATGCTGGCTATCAAGGCCCATTGTGTGAAGTATGCAGCCCTGGATACCACAAACAATTGCAGTCGTGCAAACAATGTCCCACAAAGAAATGGATGATTGTCCAGCTGTCAATCTTGGCGACAGTAGTTACGATAGTCATCGCAGTTGTGGTGTGGACAGGCaaaaagaaaagcaagaaaACAGAAGGACGCTCTGCCGTGGATATAATCCTTGGAAGGCTCAAAATTATTATTGGTTTCTATCAAGTAACATATGGAGTTCTAGAAGCATTCTCGTACATTAAATGGCCAGACTCTCTTGCGCTTATTGGAAAATATTCCGAGCTTTTGCAGCTGAGTGTTTTTCAGATAGCACCAATTCACTGCCTCTTCCCAAATTTAAAAATCAACGCTTTTGGAAGTTTGTTTGCCATAATCGCCATGAATGCTACTGCCATTTTTCTGTCTGTCCTTGCTTACGGACTTAGAAAGCTATTTCTACTGCAGAGCACATTAAACAGAGAACAGAAGGAGAAGAaagctgccaaaaccaaagagCTCATCTACCGAAacttgtttttcttcctgtacgTGACTTTCCTCAGTACGTGCTCAAAGACAGCAAACGTGCTTCCCCTTGCTTGTCGCACCCTTTGCCTCGACGAAAAGGACGAAATGTGTGACGTATTCCTAAAAGCAGACTACAACATAAGATGCGAAGGTCCAAAGTACAATCGTTTGGTTATCGTTGCATACTGCGCTGTTTTTTACATACTGTTTCTTCCAACCGCATCTCTGATAGCTCTTTGGAGACAACGTAGGGCACTCCGCATAAATGAAAGCCAAACCGAGAATAGAGGATTGGAGGCTCAAGATCAAGGCACAGAAATTATCACAGGGTTAAGATTCCTATTTGAAAACTATAATTCTCATTCATGGTATTGGGAATTAATTGAAACGATTCGCAAGGTTGTTTTGACATCTGGTTTGATACTTGTGGGTGGGGAGAGCAGGGCGTATGTTGGACTAGCTTGTGTCATGTCAGGGCTTTATGGAATGTTCTTCGCCTATATCAGCCCTATAGTGGATCCATTTGAGAATAAATTAATGTTAACATCTCTCGCCGTCACATTCGTTAATTTAGGCATAGGAGCTGTGAGCAAAATCCCAAAAGAGAATATACCAGCCTCCATAGACCCATACGTGGACAGTGTCATGTTCAAGATTCTTGTGTTTGGAGCTAACTCGTTAGTTATTGGTCTTCTCGTAGtgcaATACGTTGTATACATTTATCGTTACATCAAAGAATGGCGCAAAAATCCACAATGGTCCTTTTCTTGTTGCCTGGCCATGGTCCTGCCTCTTACAGACTTGCAGAGTGAAATACGTGGACTGACTGGCAGGAACGTTCTTAAGCAACAACTTCAAACTGGTAAAATCAACATGCCGTCGATGTCTGACAGTTTTAAAGACAGCGGGGCAGTTACCTTTGGTCTTGAAGAAGACGAAACGAGCCTAAAGAAGATAACAAGGAAGCGTGGAAAAATTACTAACGGCAACAGCGAGGAAAATAACAAACTTATTTGTAGCGTGAGCTCGACTGATGATGGAAAAAGTCTTATTCATGAGCTTCCAATAGAGATGGACGACACTTCCCTTTAAGTTATTGTTTCTATGACAATAGCATGAAAAATTGTTTCAGCATAAAAGGATAACTGAACTTTGGCTACATCCGGGTA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13855	LRR_8	Leucine rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR009030	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04606	GRM3; metabotropic glutamate receptor 3	-	G protein-coupled receptors	ko04030	deepkoala