Gene detail

Detailed information of FUN_010704-T1 in Dendrogyra cylindrus

Genomic Location: contig_15:3545702...3555308
NR annotation: XP_020628504.1, hemicentin-2-like [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P98160	Basement membrane-specific heparan sulfate proteoglycan core protein OS=Homo sapiens OX=9606 GN=HSPG2 PE=1 SV=4
Q8AXY6	Muscle, skeletal receptor tyrosine protein kinase OS=Gallus gallus OX=9031 GN=MUSK PE=2 SV=1
G5EBF1	Protein sax-3 OS=Caenorhabditis elegans OX=6239 GN=sax-3 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01391	Collagen	Collagen triple helix repeat (20 copies)	Repeat	Interproscan
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR008160	Repeat	Collagen triple helix repeat	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10075	BASIGIN RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007156	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan
GO:0007411	Biological Process	axon guidance	Interproscan
GO:0030424	Cellular Component	axon	Interproscan
GO:0070593	Biological Process	dendrite self-avoidance	Interproscan
GO:0098632	Molecular Function	cell-cell adhesion mediator activity	Interproscan