Gene detail

Detailed information of FUN_010713-T1 in Acropora pulchra

Genomic Location: ptg000007l:2036393...2045155
NR annotation: XP_015757765.1, PREDICTED: nuclear inhibitor of protein phosphatase 1-like [Acropora digitifera]
Species abbreviation APULC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

FUN_010713-T1

TTCCTCATCGTTCGCACAAAGCGTGACTCAAGATGGCGGCACAGAAGCCGGGAGTTCCTTCAACTGCGCCACCTTTTGAGGTCCCCAGCTGGGCAGGGAAACCGCCTCAAGGGCTTCATTTAGATGTTATGAAACAGACAAGTTTAGTAGAGAAACTGATCATTGACCAGAAGTCATACTATTTGTTTGGAAGGAACAAAGAAGTTTGTGACTTTTCATTGGAACACACATCCTGTTCAAGAGTACATGCTGCGCTTGTGTTTCACAGACATCTAAATCGCTCTTTCTTGATTGATCTCAAAAGCACTCATGGTACGTTTATTGGCACTATACGTTTGGAGCCACAGAAACCAACTCAAGTGCAGGTTGATAGTGTCATTAGATTTGGTGCATCTACCAGGAGCTATGTTCTGCGAGAGAAACCAGCCATGCCCAGCTCAGCCACAAAGCTATCGGAGAATGCACCAGACAAGACTGAGCAAGACAATGAAGAAAGTTCAAAGGGAGGATTGCTTGGGCTTCCTGAATCAGACACTGATCTTGATGATTTGACGGAATTCAACACTGCCCACAATAAAAGGATATCATCCCTTGGCGTGGAAGAAGGAAACACAAACTTAGCCAGCGTAGCGTCCCTAAAACGAAAAAGAAAATCATCCCTTTCTGTGGCATTTAGAGAGGGAGAGGAAATAATTAATCCAGAGGATATCGACCCCACCGTAGGCAAGTTTAGAAATATGATCCAAACGACTCTTGTGGTTCCAAACAAGAAAATGCGAGGTCCAGTGTCACCAATGGGCAACTTAACCGAGAACATCACGCGGCGACTTCAAAGTTTTACTTATTCGCAAGGTCTTTATTCCAATCTCCCAGGAAGCGGACTTGTTCCCGAACCCACCAGTCCCACGTCGCCCACCACGCAACATAAACCGCGCATGACCATCACTTCGGCACCCGATGTATCTTCGCCGACTTTGCCGACCTCTCCGAAAATGCCCGTGCCCGAACCGATCGCAACAGTCCCGTCTATGCAAAATGCGCAAATGACGATTGCCGAAGCGCCCAAAAAGAAATACGCGAAAGAGGCGTGGCCCGGAAAGAAACCAACGCCGTCTTTACTAATTTAGGTTCGCATCGTGTATTTATTAGAGATTTTAAACAGCATTTTACAAATTATTGAAGAAAAGGTGTTTGGGAACTCGTGGCAGTTGCTGATGATCCTGTAAAAAGTTCGACTAATCAAGGGCGAGACTGAACTGACGGTCAAACAACTCTTCTGCAAATTTACAGTTTTAGCGAAATGTTAAGTAAAAAAGATTGAATCGTTGAAAGGCTGAGCCAGTACGTTACTTTTGTCAAATGTTTTTAGAGATCAATTTGATTCCTTTTAGAGTGTAACTTAGGTGTCGCTCCCATAAATTTTCGTCCTTTTTGTAGGTAGTGTATATAGGTAACCGTCACTTCAAAAAGTGGTTACATCGTTTCCAAATGGGGTTAGATTACGTCTGCAACACAGGCTACATTTCTTTGTGCTTATTTTCCACATGGCTCGTGTTCCTTTGTTCTTCCGGGCTGACTATATTAAATAAACCGCGCTAATTAGAGCGGTTTTCAAATGACTGTCGAAAAACCAAAACCAAAGCAATTACTCCGACCAATTACAACAGGAGCAAGCAGCGCGATGAACCAATCACAATTCCGAGCAATTACATGTAACTCGCTCGGAGTGCGGGAAAAATTACGCGTACGTGGAGCGATTGGTTTTGGTTTTGATTCTCATTGGTTGAAAAACTAGTGTGTCTTTTAAGCCAATCACTAAGCGTAGCAATCGCAATCACGTAATTACTTTCGACAGTCATTTGAAAACTGCTCTATCAACAGCTAGGGGACTAGAATTGATAATCCCCTAGAGAAATATTACAGAAATATTCTCCTCGCGGCCCACCCACTTGCATCGCATTCAGCGCACTGTCAAACAAGACCACAATTTCACTTCAACAGCGTTGCATTTATTTTACCAGAACTGTTATTACATTTTAAACACTTCTGAATAGTTGTTGAAATTGAAAACATGAGAATTGTTTACCATTGTTTTACACCACAATTCTGCAACCTCCCC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q28147	Nuclear inhibitor of protein phosphatase 1 OS=Bos taurus OX=9913 GN=PPP1R8 PE=1 SV=1
Q12972	Nuclear inhibitor of protein phosphatase 1 OS=Homo sapiens OX=9606 GN=PPP1R8 PE=1 SV=2
Q8R3G1	Nuclear inhibitor of protein phosphatase 1 OS=Mus musculus OX=10090 GN=Ppp1r8 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006210 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00498 all species →	FHA	FHA domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000253 all species →	Domain	Forkhead-associated (FHA) domain	Interproscan
IPR008984 all species →	Homologous_superfamily	SMAD/FHA domain superfamily	Interproscan
IPR050923 all species →	Family	Cellular Process Regulator and RNA Processing Protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23308 all species →	NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003729 all species →	Molecular Function	mRNA binding	Interproscan
GO:0004865 all species →	Molecular Function	protein serine/threonine phosphatase inhibitor activity	Interproscan
GO:0016607 all species →	Cellular Component	nuclear speck	Interproscan
GO:0035308 all species →	Biological Process	obsolete negative regulation of protein dephosphorylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13216	PPP1R8, NIPP1; nuclear inhibitor of protein phosphatase 1	EC:3.1.4.-	Spliceosome	ko03041	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.