Gene detail

Detailed information of FUN_010728-T1 in Acropora pulchra

Genomic Location: ptg000007l:2155418...2159000
NR annotation: XP_015757772.1, PREDICTED: poly(U)-specific endoribonuclease-B-like [Acropora digitifera]
Species abbreviation APULC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q503V9	Uridylate-specific endoribonuclease B OS=Danio rerio OX=7955 GN=endoub PE=2 SV=1
Q8JFY9	Poly(U)-specific endoribonuclease-A OS=Xenopus laevis OX=8355 GN=endou-a PE=1 SV=1
B1H3D5	Poly(U)-specific endoribonuclease OS=Xenopus tropicalis OX=8364 GN=endou PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001018 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09412 all species →	XendoU	Endoribonuclease XendoU	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037227 all species →	Homologous_superfamily	Endoribonuclease EndoU-like	Interproscan
IPR039787 all species →	Family	Poly(U)-specific endoribonuclease	Interproscan
IPR018998 all species →	Domain	EndoU ribonuclease, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12439 all species →	PLACENTAL PROTEIN 11-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004521 all species →	Molecular Function	RNA endonuclease activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_010728-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.