Gene detail

Detailed information of FUN_010760-T1 in Acropora pulchra

Genomic Location: ptg000007l:2456863...2464271
NR annotation: XP_029199212.2, uncharacterized protein LOC114964054 [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_010760-T1

ATGGTCTTTAAAAGATCGCTTAAAAATGACAACAGTACCGCCCCTTTCACTGTCAATTTCCCGACCAATTACCACGCAACTGGAAGACTGTTTCTACCCCACAGCAATATTGTGGAGCCGTTTGAAATATGGTTCACAAAAGACTTCAACCGCAGTCGGATCGATTATTATTACGGCACGGATAAAACATTCCAAAGAGCGGATCTCGGCAAGTATGGCGTGACATTTAAAGTGGTGCCAATGCATACGGAGGAAGCTGGAAATTACATCGGCTGCTGGAACCTCGAAGGACACAAAGGATGGCCCATAATCCCACAGCCGATAGTTCCCAACATGTCGTACTTCAAGTACGCAGGCGAAGAGGTTTATATGGGTACGCCTGCCTCTAGATGGGAATACCGCTACATGGTGTATGGATTACTGAACAGTCACACCCTACTAGTCAGTAAGCTCGACCCAATCCGTCCCGTGCGGTATGAGATGAAAGGTTACGACAGCTTAATGGCGTCCTATTATGATAATTATGTCGTGGAATACATCTCTTTTGAAGAGTGGAAACCTGACTTGGAGAAATTTGAGCTACCGAAAGATCAATGGTGCTACAATTGGTCTCATACTATGGACTCACATTTTGTTTCCAATCCCATGGGCGAGTTTATGTCGCACGGTGAGGATGTCGTCGAGGAGATGTACTCCATTTACAAACAACAGCACGGAAAAATTCACAGTTCCAAACATGAACACGTCAAAAGAAAACACATATTTCGTCATAACATGAGATACATTAGGGCCATAAATCGGCAGAATTTAAACTACAAATTGGCTCCAAATCATTTGGTTGATCTTACAGATGAAGAATATGATGGCCATGCAGGTCTTAGCGAGGATAACGGTATAAAACACGAGGGAGGAGTCCATCTTGAAGAACATCACGAAGCTTACAGTAACATGAGCACTGTGCTGAAAACGATTGAGGTTCCAGATGAACTTGATTGGAGAGATTACGGTGCGGTGACCGCTGTACGAGGTCAGGGTATCTGCGGCTCGTGTTACGCTTTGGGAGCTGTGGGAGCAGTGGAAGGAGCCTATTTCATGAAGACAGGTCGATTGTTGGAACTTTCTGCTCAGCAGATCATTGACTGTTCCTGGGGGTCTGGGAACCACGGCTGCAGAGGAGGCTGGTACAACAAAGCATTGAGTTGGGTTTACATGAATGGTGTAGCGGAGGCAAAGAATTATGGGCCGTATCTGGCTCAGGAGGGAACGTGTGAAACCCTACGAATCAAAGAACGCATCAAGATCGACGCTTTTGCCTTCGTCCCTAAGTACAACAACAGCGCCCTCAAAAGATCCATTGCCAAATATGGACCGGCATGCGTGTCAATCAACCAGAAGCCATTGTCATTGAAATTCTACAGCTGGGGCGTCTACGATAATCCTGAATGCGACAACAGCTCTACACGCCATACTGTACTTGTTATCGGCTATGGAAAGGAGAAAGGAGTTCCTTACTGGCTTGTTAAGAATTCCTGGTCTTCCTCCTGGGGAATAGATGGTTACATCAAACTTGCTTGGAAAGACAACATATGTGGCGTAACAAAGAACCCTGTGGTAGCGCTGTTCAAAGACACAAGTTTTCAATTTCCTGTCAAGGAGAAAATTGATCACGTGAATCCCTTGGATAGAGACTCTTTTGGAAGAAAGGTGCATGCACAGCACAGGCCGAGTTTCCACGGTAACGTCAATACATCTCGTCTCCCCGGAAATGTCAAAAACTCTAGAGTGAATATGTCTGCTGTTGAGAAAAGTGAGGGGACATCTGGAAAGAAATTGGAGAGCAAAATAGTTTCAAGCAACCCTTTACGAGGTGAAGGAAAAGAAAAGAGCACTCGCAATACGTTGAAGATGAAGAAAGAGGCAATAAAAAAGCAAAAAAATGTACTTTCAAATAATACTTTGAGGAGAAAAGGTCAGAGTCAGACAGCATCCACAACGACAAGTGTTATTTACACGCAGAAAGAAGAGAAAAGCGGTGATCAAATTGTGATACATCGTAAGACAAAGAAACTTGAAACAGCGACAGAAGACGGAAAATCTGTGAAACCAGTCACATCGCTGAAGAAAGATTCAAAAAAGGCTGATAAAGACGGACTTGTCAAAAGCAAAGACGACACTGTGACCGATGGACCTTCTAATTCGCAAATGAAGGACTTTGATTACCAGGATGAGGGGAGAAGTTTTGATAAAACTTCTCAGCCATTAAAAAGAAAGAGTCATAGCTTTAAAATTGACAACAAGCAGGAAAACCCTGTGGAGATGGCCGAGATAACCGAAATCCCTAAAGGGGCGACAAACGGAGAGAGAAGTCAACCCTTTGTGGGTTATGTCCATAAAGGTGGAACGAATCTTGACATGTTTCAAAGTCGTGGAATCAATGAAATTCGAGCGGACGGAAATTTATTTTACAGCCCAGAGCAGGCGGAAAACATTGCAACGGAGATTGCAGAACCAGAATATTACTATCCTTTGTATGATTACAATATCAACAATGCTTATTCTTTGGAGTATGGTACACGAGAAGGGTGGAAGGGAAAACCTCCTTATCAAGAATACGTTTCAAAGGTGAATGACTTGAACCAGTGGGTTCCCGCCAACGATCTAAGGTCAGAGCTTGGTGTTTCAAGGAAATATTTCCTGAACAATGAAGGGAATGTTGGCCTGGAACATTCGACGAAGACGCCGGAGCAATTGAAAATGCTCCATTCAGATTCTCGTAGCGCAAAAGTACAAGCGACCAGCAATTTAAAGACAACAACGAAGCCAGCTACTGCAAAAAGAATAACGCTTAAGGCAGACGCAAAAGGCAAAAAAGTAACCGCAACAAAAACAGTGAACAATAAGCATAAAAAACGAAGCAGGCCCTTCAGACATTACGCCGGAAGACTTCAAGATATTTACGACAAGCTTGAGCGAGTTATTGCCTCCAGCCTTGTGAAGAAGAGACCACAAAGGAAAAATCATGTTCTGAAAGGGTATTGA

Transcript

FUN_010760-T1

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O35186	Cathepsin K OS=Rattus norvegicus OX=10116 GN=Ctsk PE=2 SV=1
P55097	Cathepsin K OS=Mus musculus OX=10090 GN=Ctsk PE=1 SV=2
Q54TR1	Counting factor associated protein D OS=Dictyostelium discoideum OX=44689 GN=cfaD PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000586 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08246 all species →	Inhibitor_I29	Cathepsin propeptide inhibitor domain (I29)	Domain	Interproscan
PF00112 all species →	Peptidase_C1	Papain family cysteine protease	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038765 all species →	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR025661 all species →	Active_site	Cysteine peptidase, asparagine active site	Interproscan
IPR013128 all species →	Family	Peptidase C1A	Interproscan
IPR039417 all species →	Domain	Papain-like cysteine endopeptidase	Interproscan
IPR000169 all species →	Active_site	Cysteine peptidase, cysteine active site	Interproscan
IPR013201 all species →	Domain	Cathepsin propeptide inhibitor domain (I29)	Interproscan
IPR000668 all species →	Domain	Peptidase C1A, papain C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12411 all species →	CYSTEINE PROTEASE FAMILY C1-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004197 all species →	Molecular Function	cysteine-type endopeptidase activity	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0005764 all species →	Cellular Component	lysosome	Interproscan
GO:0008234 all species →	Molecular Function	cysteine-type peptidase activity	Interproscan
GO:0051603 all species →	Biological Process	proteolysis involved in protein catabolic process	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_010760-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.